Pairwise Alignments

Query, 308 a.a., Putative ROK-family transcriptional regulator from Variovorax sp. SCN45

Subject, 405 a.a., ROK family protein from Vibrio cholerae E7946 ATCC 55056

 Score = 77.4 bits (189), Expect = 5e-19
 Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 42/268 (15%)

Query: 37  DNDAVAVQIIRMIEEVCAEQGVDPASIDRVGVSSTGPFELHDGLV-ELATPNICGGIAGP 95
           D D V  +++  IEE           +  + ++  G      G+V ++   N+     GP
Sbjct: 119 DQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGP 178

Query: 96  ----SRGLPNSWMTAIVEAPLVKRFGSVRVENDAVAALEAERHWGALKGLDNCAYATWST 151
               + GLP                  V V ND  A   AE+ +G  + +DN    +   
Sbjct: 179 EIYKATGLP------------------VFVANDTRAWALAEKLFGHSQDVDNSVLISIHH 220

Query: 152 GVGVGLCVDGRALRGKNGNAGHAGHSFVVDDTSGALCGCGNYGDVEALVSGSSIEHRFGQ 211
           G+G G+ +DGR L+G++GN G  GH  +  D  G  C CGNYG +E + S  +I  +   
Sbjct: 221 GLGAGIVLDGRVLQGRHGNIGELGH--IQIDPQGKRCHCGNYGCLETVASSQAIRDQVTA 278

Query: 212 ----------------SAAELFNAASAGEPEALEIAEALCRVVGRMLYNMVITLDLQRIS 255
                           S  ++  AA+ G+P A+++ + L R +G  +  ++   + ++I 
Sbjct: 279 RIQAGEPSCLATVEEISIEDICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKIL 338

Query: 256 LGGSVFWHHRDFVLPRLQAQIDGKLLPL 283
           +GG V    +  + P ++  I  + LP+
Sbjct: 339 IGG-VINQAKSILYPSIEQCIREQSLPV 365