Pairwise Alignments

Query, 314 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 303 a.a., Predicted permease, DMT superfamily from Pseudomonas stutzeri RCH2

 Score =  290 bits (742), Expect = 3e-83
 Identities = 162/283 (57%), Positives = 195/283 (68%), Gaps = 9/283 (3%)

Query: 20  RAGIGLAEVMLLLVAAVWGGSYAVAKQATQQLPVLEFIALRFGLTFVVLLPALGPLFGAR 79
           R G+ LA+ MLL+VA +WG SYAVAKQA    PVL F+A+RFGLTFV+LLP L       
Sbjct: 6   RQGLWLADGMLLMVALIWGSSYAVAKQALLFYPVLGFLAIRFGLTFVLLLPQLR----GA 61

Query: 80  WRQGLAVGGLLGANLLAIFVCETFGVSLTSASNAAFLISLCVAITPFVEWWLLGQRPARR 139
            R+ L  G  LG  +LAIF+CET+GV LTSASNAAFLISLCV ITPF+EW LL QRP   
Sbjct: 62  GRRALRPGLPLGLVMLAIFLCETWGVMLTSASNAAFLISLCVVITPFMEWLLLRQRPHNT 121

Query: 140 VFWAAGLSALGAAMLSAASPTDLSLGWGDGLMVAAAFLRAVMVCMTRRLAGRHALPALTL 199
           +F A GLS  G  +L+      LSL  GD LM+AAA LRAV+VC+TRR+     +PAL L
Sbjct: 122 LFLACGLSLAGVWLLTGGP--QLSLNLGDALMLAAALLRAVLVCLTRRMTAGREIPALAL 179

Query: 200 TALQSGVMALGAAAISLVASPPNGAWHMPPATASFWWGMAYLVLLCTVFAFFAQNHAASR 259
           TA+QSGV+A G   ++++     G     P    FW+G  YLVL  T+FA FAQN A  R
Sbjct: 180 TAVQSGVVAAGCILLAMLLP---GGLPALPVEPGFWFGTLYLVLFATLFAMFAQNRALGR 236

Query: 260 SSPSRVSLLMGSEPVFGALIAVYGFGERIGPWGWAGGLLIVAA 302
           SS +RVSLLMGSEP+FGA+IA    GER+GP GWAGGLLI+ A
Sbjct: 237 SSATRVSLLMGSEPLFGAIIAGVWLGERLGPMGWAGGLLIMLA 279