Pairwise Alignments

Query, 314 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 300 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 81/293 (27%), Positives = 125/293 (42%), Gaps = 36/293 (12%)

Query: 26  AEVMLLLVAAVWGGSYAVAKQATQQLPVLEFIALRFGLTFVVLLP--------ALGPLFG 77
           A + LL   A+WG  +     A   +  L FI LRF +  +V LP        A  PL  
Sbjct: 6   ANLFLLFSGAIWGAGFVAQSTAMDAIGPLWFIGLRFAIATLVALPLALLEKKQAATPLPR 65

Query: 78  ARWRQGLAVGGLLGANLLAIF---VCETFGVSLTSASNAAFLISLCVAITPFVEWWLLGQ 134
              R  + VG       LA+F   V + +G+  T+ +N+ FL  L V   P +    L +
Sbjct: 66  NAMRNFVFVG-------LALFGGAVTQQYGLLTTTVTNSGFLTGLYVVFVPVLTVVFLRR 118

Query: 135 RPARRVFWAAGLSALGAAMLSAASPTDLSLGWGDGLMVAAAFLRAVMVCMTRRLAGRHAL 194
           RP   ++ AA L+A G  +LS  + +  +L  GD L +  A   AV + +    A     
Sbjct: 119 RPHWVIWPAALLAAFGIFLLSGGALS--ALTGGDMLTIVCALFWAVQLMLVGLFAPATGR 176

Query: 195 PALTLTALQSGVMALGAAAISLVASP-----PNGAWHMPPATASFWWGMAYLVLLCTVFA 249
           P L L+  Q  V A+    ++ +  P      NGA  +P         + Y  +  +  A
Sbjct: 177 PML-LSMTQFAVCAVAGCVLAGLFEPLSLDAINGA--LPQ--------ILYAGIFSSGIA 225

Query: 250 FFAQNHAASRSSPSRVSLLMGSEPVFGALIAVYGFGERIGPWGWAGGLLIVAA 302
           F  Q      ++  + ++ + SE +F AL  V   GE I P G+ G  +I  A
Sbjct: 226 FICQVVGQRYTTAPQAAIFLSSEALFAALFGVLLLGETITPVGYVGCAVIFLA 278