Pairwise Alignments

Query, 260 a.a., 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-) from Variovorax sp. SCN45

Subject, 281 a.a., L-2,4-diketo-3-deoxyrhamnonate hydrolase; 2,4-dioxopentanoate hydrolase (from data) from Sinorhizobium meliloti 1021

 Score =  151 bits (381), Expect = 2e-41
 Identities = 84/212 (39%), Positives = 119/212 (56%), Gaps = 8/212 (3%)

Query: 45  PPLAP-TARPRTILALGLNYADHAKELEFKAPEEPLVFVKGQSALIGHRQHTHRPAGVQF 103
           P L P  A     + +GLNY+DHA E     P EP++F+K  SA++G       P G + 
Sbjct: 61  PRLGPCVAGTGKFICIGLNYSDHAAETGATVPPEPIIFMKATSAIVGPNDDLVLPRGSEK 120

Query: 104 MHYECELAIVVGKTARNVKRDDAYDFIGGYTVANDYAIRDYLENWYRPNLRVKNRDTCTP 163
             +E EL IV+GKTA+ V   +A D++ GY   +D + R +    +    + K+ DT  P
Sbjct: 121 TDWEVELGIVIGKTAKYVSEAEALDYVAGYCTVHDVSERAFQTERHGQWTKGKSCDTFGP 180

Query: 164 LGPWFVDAADVPDPMALALRTTVNGQVTQQGNTRDMIFDAPFLIEYFSRFMTLSPGDLIL 223
            GPW V   +V DP  LA+   VNG+  Q G+T+ M++ A  L+ Y S+FM+L PGD+I 
Sbjct: 181 TGPWLVTKDEVADPQDLAMWLKVNGETMQDGSTKTMVYGAAHLVSYLSQFMSLRPGDIIS 240

Query: 224 TGTPDGV-VDCKP------GDVVVTEIERIGA 248
           TGTP GV +  KP      GDVV   IE +G+
Sbjct: 241 TGTPPGVGMGMKPPRYLKAGDVVELGIEGLGS 272