Pairwise Alignments

Query, 326 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 287 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  142 bits (358), Expect = 1e-38
 Identities = 90/293 (30%), Positives = 153/293 (52%), Gaps = 14/293 (4%)

Query: 29  TWLTLTVAGLAMGMIIFIIASGLTLVFGLMDVLNFGHGVFIALGAFVASSVLGLMGDWTG 88
           T  ++ V  LA G ++F+I+ GL++  GLM V+N  HG F  +G ++AS     +G   G
Sbjct: 3   TIFSIAVDALAYGTVLFVISIGLSVTLGLMRVVNLAHGAFAMIGGYIASYAARDLGLGYG 62

Query: 89  SGELWRNLVAVFPAMLVAMAVAGAVGLAFERFIVRPVYGQ-HLKQILITMGGMIIGEELI 147
           +  L    +AVF  +++A+ +        ER + R +YGQ  L Q+L+T+G       + 
Sbjct: 63  AAVL----IAVFGTIVIAIPI--------ERLLYRRIYGQPELTQVLMTIGITFCIIGIA 110

Query: 148 KVIWGPAQIPLPLPEALRGSLLVGDAAISKYRLLAVAVGVVVFGVLAWTLGRTKIGLLIR 207
             ++GP    +PLP +L GS  +G  +I+ +R+ A+  G+ V G L + + +T  G+ +R
Sbjct: 111 NYVFGPTLKTIPLPPSLEGSADLGFRSIAVHRIFAIVCGLAVAGALWFAIEKTAFGVKLR 170

Query: 208 AGVQDREMVESLGYRIGRLFVGVFVVGSALAGLGGVMWGLFQQNLVPQMGAQVNVLIFIV 267
           A V +  M  +LG R   ++   F V   LA  GGV+ G     + P    +  V   +V
Sbjct: 171 AAVDNAAMAAALGVRTEVVYAVSFAVAVGLAAFGGVV-GAELLPVEPYYALRYMVTFLVV 229

Query: 268 IIIGGLGSTGGALIGALLVGLMTNYIGFLLPTLTQFASIFLMVAVLLWRPQGV 320
           + +GG GS  GAL   LL+G +     +L+P   +F     ++A++   P+G+
Sbjct: 230 VSVGGAGSIPGALAACLLLGGIDTTGRYLMPEFGEFFFYLAVIAIVCVFPRGL 282