Pairwise Alignments

Query, 326 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 343 a.a., branched-chain amino acid transport system permease protein from Phaeobacter inhibens DSM 17395

 Score =  380 bits (977), Expect = e-110
 Identities = 189/317 (59%), Positives = 242/317 (76%)

Query: 7   WKPLLLAPVLALAALPLTGSFSTWLTLTVAGLAMGMIIFIIASGLTLVFGLMDVLNFGHG 66
           + PL+L PVLA+A L    + ++WLTLTV+GLAMGM+IF++ASGLTLVFGLMDV+NFGHG
Sbjct: 23  YAPLILVPVLAIAGLIAVQNPASWLTLTVSGLAMGMMIFLMASGLTLVFGLMDVINFGHG 82

Query: 67  VFIALGAFVASSVLGLMGDWTGSGELWRNLVAVFPAMLVAMAVAGAVGLAFERFIVRPVY 126
            F+++GAF+  SVL  +G  T +  L  NL+A+  A+L AMA    +G AFER IV+PVY
Sbjct: 83  AFVSVGAFIGISVLLTLGHLTNAPSLGLNLLAILAAVLAAMAATAVMGWAFERVIVKPVY 142

Query: 127 GQHLKQILITMGGMIIGEELIKVIWGPAQIPLPLPEALRGSLLVGDAAISKYRLLAVAVG 186
           G HL QIL+TMGG+II E+LI V+WGP +I    PEAL+G+L  GDAAI KYRL+ V VG
Sbjct: 143 GNHLSQILVTMGGLIIAEQLIIVLWGPEEIYFTRPEALKGALTFGDAAIEKYRLVTVGVG 202

Query: 187 VVVFGVLAWTLGRTKIGLLIRAGVQDREMVESLGYRIGRLFVGVFVVGSALAGLGGVMWG 246
           + VF  + + L RTKIGL++RAGVQ+ EMV +LGYR+  +F+GVF+ GSALAGLGGVMWG
Sbjct: 203 LAVFAAMRFVLRRTKIGLIVRAGVQNGEMVAALGYRLRLVFIGVFIAGSALAGLGGVMWG 262

Query: 247 LFQQNLVPQMGAQVNVLIFIVIIIGGLGSTGGALIGALLVGLMTNYIGFLLPTLTQFASI 306
           L+Q+ +   MG Q  +LIFIV+IIGGLGS  G  IGALLVGL+ NYI F+ P L   ++I
Sbjct: 263 LYQEVITAHMGNQAMILIFIVVIIGGLGSVEGCFIGALLVGLLQNYIAFVEPKLALVSNI 322

Query: 307 FLMVAVLLWRPQGVYPV 323
            LMVA+L+WRP G+ PV
Sbjct: 323 ALMVAILMWRPMGMIPV 339