Pairwise Alignments

Query, 464 a.a., DNA repair protein RadA from Variovorax sp. SCN45

Subject, 469 a.a., DNA repair protein RadA (NCBI) from Rhodospirillum rubrum S1H

 Score =  426 bits (1094), Expect = e-123
 Identities = 234/463 (50%), Positives = 299/463 (64%), Gaps = 18/463 (3%)

Query: 1   MAKDKTTFVCSECGGTSPKWLGKCPSCGAWNTLIEQA-AGAAGGGPANNRFGTQ--FASL 57
           MAK+   FVC  CG   P+W+G+C +CG WN++ E+A A A   G    R G +  F SL
Sbjct: 1   MAKNAPRFVCQACGAVYPRWMGRCEACGEWNSIAEEAPAEALPKGQTGGRGGQRLSFVSL 60

Query: 58  AGASELATLSEIEATDVARTPTGLDELDRVLGGGIVSGGVTLIGGDPGIGKSTLLLQAVD 117
            G                R  TG+ ELDRV GGG+V+G   LIGGDPGIGKSTLLLQAV 
Sbjct: 61  EGVG----------APPPRLLTGIPELDRVAGGGLVAGSALLIGGDPGIGKSTLLLQAVA 110

Query: 118 ALQRAGQNALYVTGEESGSQVALRSKRLGLDHSQVQVLAEIQLEKIIATLDATRPA-IAV 176
            L R G  ++Y++GEE+  QV LR+ RLGL+ + V + A   +  I+ATLD+  P  + V
Sbjct: 111 GLARGGARSVYISGEEAIDQVRLRALRLGLEKAPVDLAAATSVRDIVATLDSGEPPDVVV 170

Query: 177 IDSIQTVYSDQLTSAPGSVAQVRECAAHLTRFAKTSGTAVVLVGHVTKEGALAGPRVLEH 236
           IDSIQT+Y D L SAPG+VAQVR  +  L R AK  G  + LVGHVTKEG +AGPRV+EH
Sbjct: 171 IDSIQTMYLDTLDSAPGTVAQVRAGSHELIRLAKRRGFVLFLVGHVTKEGQMAGPRVMEH 230

Query: 237 MVDTVLYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTERGLKGVTNPSAIFLSQHAEPV 296
           MVD V+YFEG+    FR++RA+KNRFGA +EIGVF M++ GL  V NPSA+FL++    V
Sbjct: 231 MVDAVIYFEGERGHPFRILRAVKNRFGATDEIGVFEMSDAGLSEVPNPSALFLAERRGNV 290

Query: 297 PGSVVLVTLEGTRPMLVEIQALVDNGGP-SPRRLSVGLDRDRLAMLLAVLHRHAGVACMD 355
            GS V   +EGTRPMLVEIQALV    P S RR  VG D  RLAM++AVL    G+A   
Sbjct: 291 TGSCVFAGMEGTRPMLVEIQALVGPSAPGSARRAVVGWDGGRLAMVMAVLETRCGLALGG 350

Query: 356 QDVFVNAVGGVRISEPAADLAVMLAITSSLRGKPMPKGFIAFGEVGLAGEVRPAPRGQER 415
            DV++N  GG+RI EPAADLAV  A+ SS  G P+P   + FGE+GL+GE+R    G  R
Sbjct: 351 NDVYLNVAGGLRIGEPAADLAVAAALVSSFSGVPVPPDMVVFGEIGLSGEIRAVAHGDTR 410

Query: 416 LREAAKLGFSVAVV---PKANAPRKGTKEIEGLTIHAVDRIEE 455
           L+EAAKLGF  A++   P+ +  R G    EGL +  +  +++
Sbjct: 411 LKEAAKLGFDQALMPARPRDSGKRGGPGVKEGLRMREIGHLQD 453