Pairwise Alignments

Query, 504 a.a., Glycine betaine transporter OpuD from Variovorax sp. SCN45

Subject, 688 a.a., choline/carnitine/betaine transport from Pseudomonas stutzeri RCH2

 Score =  364 bits (935), Expect = e-105
 Identities = 188/486 (38%), Positives = 293/486 (60%), Gaps = 9/486 (1%)

Query: 4   VVSAGLIAAVVLWGLLSPASLD---SVFSTALSGITRNFGWFYLWVVLGLVVLAFFLAFS 60
           VV  G   A+VL+ + +    D   +V +T L  I+  FGWFY   VL  ++    +A S
Sbjct: 21  VVFYGSAIAIVLFAVWTMFFTDRSLAVINTVLGWISNTFGWFYFLAVLLYLLFVVVVATS 80

Query: 61  RFGDLKLGEEDDEPEFSLGAWFAMLFAAGMGIGLVFWGVAEPISHYANPPPGVVAGTPDA 120
           R+G ++LG +  +PEF++  W AMLF+AG+GI L+F+ +AEPI+ +  PP G   G+  A
Sbjct: 81  RYGKIRLGPDHSKPEFNVVTWAAMLFSAGIGIDLLFFCIAEPITQFLEPPVGE-GGSTQA 139

Query: 121 AGVAMRYAFFHWGLHPWAIYGIVGLSIAFFTFRRKT-LALVSSATEALPWRFVRRLSPAF 179
           A  AM   F HWGL  W +Y +VG+S+A+F+FR+   L++ SS       R    +    
Sbjct: 140 ARHAMELTFLHWGLSGWGVYTLVGMSLAYFSFRQGLPLSIRSSLYPIFGKRIYGPIGHTV 199

Query: 180 NVLAVVATAFGVAASLGMGATQINSGLHAAFGTAIGRGTQAAIIVVTTVLFVTSAVSGVE 239
           +  AV+ T FG+A SLG+G  Q+N GL+  FG   G  TQA ++V+  V    SA +GVE
Sbjct: 200 DTAAVLGTIFGIATSLGIGIIQLNFGLNYIFGIPEGTLTQAVLVVLIVVFSAISAATGVE 259

Query: 240 RGVKWLSMGNLVLAALLALVVLVLGPTVAIVETFTNTLGAYIAEFVRMSLRMNPFRN-SS 298
           RG++ LS  N++LA LL L VLV+G TV ++      +G Y + F+ +SL    +R  + 
Sbjct: 260 RGIRRLSEFNMLLAVLLLLFVLVVGDTVFLLNALVMNVGDYFSNFISLSLDTYAYRRPTD 319

Query: 299 WVGDWTLFYWAWWLAWSPFVGLFIARVSRGRTIRQFILGTVIAPTLVGFAWFSVFGGAAL 358
           W+  WT+F+WAWW+AW PFVGLF+AR+SRGRTIR+F++GT++ P     AW S+ G +A+
Sbjct: 320 WLNAWTVFFWAWWIAWGPFVGLFLARISRGRTIREFVIGTLLLPLAFMMAWMSIMGNSAI 379

Query: 359 NFQIFQGVPLVEAVKADVSTTMFVMFKAMPMGALLSMVATLLVFVFFVTSGDSATLVLGT 418
              +   +   +   ++  +++++  +++P   L ++V T+L  VFFVTSGDS +LVL  
Sbjct: 380 EMVMGGALEFGQQAVSNPGSSIYLFLQSLPWAGLTTIVVTILAIVFFVTSGDSGSLVLSN 439

Query: 419 MST---GGNPNPPARVKITWGVLVAAIALSLLFAGGLKAIQTATIVFALPFAFVILLMAL 475
            ++     N + P  ++I W  ++  + L+LL AGGL A+Q   ++  LPF+ V+L M  
Sbjct: 440 FTSILKDVNSDAPVWMRILWAAIIGVLTLALLIAGGLTALQGTVVIMGLPFSIVLLFMMY 499

Query: 476 SVTLAI 481
            +  A+
Sbjct: 500 GLFKAL 505