Pairwise Alignments

Query, 336 a.a., DNA recombination-dependent growth factor RdgC from Variovorax sp. SCN45

Subject, 304 a.a., recombination-associated protein RdgC from Vibrio cholerae E7946 ATCC 55056

 Score =  163 bits (413), Expect = 4e-45
 Identities = 94/296 (31%), Positives = 151/296 (51%), Gaps = 3/296 (1%)

Query: 4   FKNVIVYRIEPAWSQTLAEAEEGLGKQRFVPCGPSQEKSAGWVEPRGEANGPLVESIDGQ 63
           FKN +VYR+    +    + E+ L + RF PCG   ++  GWV   G+    +    + +
Sbjct: 3   FKNCMVYRVNREVNFNADQLEKQLAEFRFTPCGSQDKQKFGWVSALGKHGDMMTHVSENR 62

Query: 64  WLVEYMIESKQVPGSVVRRKLDERCANIEATTGRKPGKKEKKELKEDITLELLPMAFTRS 123
            LV    E K +P SV++  L+ +   +EA  GR   KKEK  LKEDI ++LLP AF++S
Sbjct: 63  ILVCAKREEKMLPASVIKDSLNAKVEEMEAEEGRPLKKKEKDALKEDIVIDLLPRAFSKS 122

Query: 124 ARVAVWIDKAENRLVINSGNASRADEVVTSLVKSLDGFAVALINTQIEPAAAMANWLLTQ 183
               V I   E  +++++G+  +A++V++ L K++    V     +I     +  W+   
Sbjct: 123 QLTFVLIMPTEGLILVDAGSYKKAEDVLSLLRKTMGSLPVVPAIPEIAVETTLTQWVKDG 182

Query: 184 EPPAGFTIDRECELKASDDSKAVVRYAKHPLDIDEVKQHITDGKRPTRLALTWDDRVSFE 243
             P GF++  E ELK+  D  A +R  K  L  DE+  HI   K  T+LA+ W DR+ F 
Sbjct: 183 NLPQGFSLMEEAELKSLLDDGATIRCKKQELSSDEILSHIQANKVVTKLAINWQDRIRFV 242

Query: 244 LTHGLLIRKITF---LEGTGDGAAGGKKEDNYDADVAIATGELGQLVPALLDALGG 296
           L     I+++ +   L+   D      +    DAD ++  GE+   +P L +ALGG
Sbjct: 243 LAEDCSIKRLAYSDELKEQNDDIPHEDRAARLDADFSLLCGEMSVFLPDLFNALGG 298