Pairwise Alignments

Query, 267 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Variovorax sp. SCN45

Subject, 257 a.a., exodeoxyribonuclease III protein from Sinorhizobium meliloti 1021

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 68/269 (25%), Positives = 115/269 (42%), Gaps = 27/269 (10%)

Query: 3   KLTSLNLNGLRSAATKGVADWVAELAPDCICMQEIRVQASDVEGRFEEMAGLKGHFHFAE 62
           K+ + N+NG+       +  W+    PD +C+QE++      +G+F   A ++   + A 
Sbjct: 2   KIATFNINGVNKRLDI-LLTWLGTAEPDVVCLQELKA----TDGQFPR-AAIEAAGYGAV 55

Query: 63  KKGYA---GTAVYTK-HAPSQVVVGWGDAEFDAEGRYLELRFDTPKRKFSVISCYFPSGS 118
            +G A   G A+  +   P     G      D + RY+E   +       + S Y P+G+
Sbjct: 56  WRGQAAWNGVAILARDREPVLTRTGLPGDSSDTQSRYIEAAVNG----ILIASLYAPNGN 111

Query: 119 SGE-ERQEAKFRFLKGFFPHLVALKKER-EFVLCGDINIAHQQIDLKNWRGNQKNSGFLP 176
                + + K  +   F  H  AL +     VL GD N+  +  D+   R    N+   P
Sbjct: 112 PQPGPKFDYKLAWHLRFNQHAAALLETGVPVVLAGDYNVVPEPRDIYPTRSYDDNALVQP 171

Query: 177 EERAWMTRLLDAGTEGAGLVDVYRKLKPDTTDEAYTWWSNRGQAYANNVGWRLDYHLATP 236
           E RA    L+D      G +D  RK+ P   +E +T+W  R   +  + G RLD+ L + 
Sbjct: 172 ESRAAFRSLVD-----QGWLDALRKIHP--KEELFTFWDYRRNRWQRDAGLRLDHILLSR 224

Query: 237 AIGALARTEQIYKTVK----FSDHAPITV 261
            +        I + ++     SDHAP+ V
Sbjct: 225 KLRRRLTGAGIDREIRALEGSSDHAPVWV 253