Pairwise Alignments

Query, 267 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Variovorax sp. SCN45

Subject, 249 a.a., exodeoxyribonuclease III from Methanococcus maripaludis S2

 Score =  173 bits (438), Expect = 4e-48
 Identities = 89/265 (33%), Positives = 157/265 (59%), Gaps = 20/265 (7%)

Query: 3   KLTSLNLNGLRSAATKGVADWVAELAPDCICMQEIRVQASDVEGRFEEMAGLKGHF---H 59
           K+ S N+NG+R+    G  +++   +PD +C+QE +VQ+  V+       GL G+F   +
Sbjct: 2   KMLSWNVNGIRACLKNGFMNFLERESPDIMCIQETKVQSGQVQ------LGLDGYFQYWN 55

Query: 60  FAEKKGYAGTAVYTKHAPSQVVVGWGDAEFDAEGRYLELRFDTPKRKFSVISCYFPSGSS 119
           +AE+KGY+GTA++TK  P+ V++G  ++E + EGR + L FD    ++ +++ Y P+   
Sbjct: 56  YAERKGYSGTAIFTKIKPNNVILGMENSEHNNEGRVITLEFD----EYYLVNVYTPNSQR 111

Query: 120 GEERQEAKFRFLKGFFPHLVALKKEREFVLCGDINIAHQQIDLKNWRGNQKNSGFLPEER 179
           G  R E + ++ + F  ++  L+ ++  V CGD+N+AH++IDLKN + N KN+GF PEER
Sbjct: 112 GLTRLEYRQKWDEDFLSYIKTLETKKPVVFCGDLNVAHKEIDLKNPKTNVKNAGFTPEER 171

Query: 180 AWMTRLLDAGTEGAGLVDVYRKLKPDTTDEAYTWWSNRGQAYANNVGWRLDYHLATPAIG 239
                +++     +G +D +R+   +   + Y+WWS R  A A N+GWR+DY   + ++ 
Sbjct: 172 NGFDNIVN-----SGFLDTFREF--NNEPDNYSWWSYRFNARARNIGWRIDYFCISKSLR 224

Query: 240 ALARTEQIYKTVKFSDHAPITVEYD 264
              +   I   V  SDH P+ + ++
Sbjct: 225 NNLKDAYIMPEVMGSDHCPVGIIFE 249