Pairwise Alignments

Query, 657 a.a., Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) from Variovorax sp. SCN45

Subject, 639 a.a., penicillin-binding protein 2 from Klebsiella michiganensis M5al

 Score =  427 bits (1098), Expect = e-124
 Identities = 237/617 (38%), Positives = 356/617 (57%), Gaps = 19/617 (3%)

Query: 3   EIRNVAADLARFKRRVIVIGLAVLFAFGLLCARLVYLQVTRHEDLAEQAESNRTAVVPVV 62
           EIR+ +A+   F RR ++  L V+  F +L   L  LQV +H+    ++  N   ++P+ 
Sbjct: 7   EIRDHSAEEMLFIRRAVIAFLLVVVCFAILILNLYRLQVDQHDFYQTRSNQNDIKMLPIA 66

Query: 63  PNRGLILDRNGIVLASNYSAYTLEITPSKVGDVEETIDSLTQVLEISPRDRRRFKRLRED 122
           P+RGLI DRNGI L  N + Y L++ PSK+ D+   +  LT +++++P+D   F+     
Sbjct: 67  PSRGLIFDRNGIPLVQNITLYRLQVIPSKIADMTALLQQLTPIVDLTPQDIADFRDDMHH 126

Query: 123 SRSFDSIPIRTRLSDEEVARFAAQRYRFPGVEIKARLFRNYPQGELASHVLGYIGRINQR 182
           +  +  + ++  LSD EVARFA   + FPGV +++   R YP G   +HV+GY+ +IN  
Sbjct: 127 NSRYKEVTLKADLSDVEVARFAVNEFHFPGVTVESYQQRAYPYGAELAHVVGYVSKINNS 186

Query: 183 EKTAMEDWDEEEQANYKGTDYIGKLGIEQSYEKTLHGQTGVEQMETSAGGRAVRRLASHP 242
           +   +    EEE  NY     IGK GIE  YEK LHG TG +++E    GR VR L   P
Sbjct: 187 DLQKLAKAGEEE--NYAADHNIGKQGIEGYYEKALHGTTGYQEVEVDNHGRVVRLLKEVP 244

Query: 243 ATPGNTVMLSLDIKLQKLVEDMFGDRRGAVVAIDPKTGEVLAFVSKPTFDPNLFVEGIDN 302
              G  + L+LD+ LQ+ +E +   +R AVVA+DP+ G VLA VS P++DPN FV GI  
Sbjct: 245 PVAGKNIYLTLDLHLQQYIESVLKGQRAAVVAVDPRDGGVLAMVSSPSYDPNPFVRGIGY 304

Query: 303 ESWAALTESIDKPLLNRALRGTYPPGSTYKPFMALAALQTGKRGPSVVVNDPGYFNFGG- 361
           +++ +L ++ D+PL+NR  +G YPP ST KP+MAL+AL  G   P+        +   G 
Sbjct: 305 QAYRSLLDNPDRPLINRVTQGLYPPASTVKPYMALSALSAGVITPTTSFFGAPTWTLPGT 364

Query: 362 ---HRFGSPEGNLGGVDMRRAIQLSSNIYFYSLANEMGVDLIHDSMKPLGFGQITGIDLG 418
              +R     G+ G +++ +AI+ S++ +FY +A EMG+D IH+ +   G+GQ TGIDL 
Sbjct: 365 QRRYRDWLKSGH-GMLNVTKAIEESADTFFYQVAFEMGIDRIHEWLSKFGYGQSTGIDLN 423

Query: 419 GEVRGVLPSTEWKRNAYKRPEAKKWYAGETISLGIGQGYNNFTMLQLAQATAIVADGGLK 478
            E  GVLPS EWK+  +K+P    WY G+TIS+GIGQGY   T +Q+ +A   + + G  
Sbjct: 424 EEYAGVLPSREWKQRVHKKP----WYQGDTISVGIGQGYWIATPIQMVKALTTLINNGKV 479

Query: 479 HKPHLVLATRNTVSGQVVPMPQPPAE--NLGYTASAI-SVIREGLTSV--VTSGTARGVF 533
             PHL+ + +    G  V   QPP +   +G   S    V+R G+  +  + +GT   +F
Sbjct: 480 QNPHLLYSMK---QGNKVERYQPPQDLPQVGDPRSPYWGVVRNGMYGMANLPNGTGYKLF 536

Query: 534 AGAAYQAAGKTGTAQAVTQAQNTKYNARALEEHQRDHALFMGFAPVNDPKIAIAVIVENA 593
             A YQ A K+GT+Q  +  +N  YNA+ +    RDH  +  FAP   PK+A+A+I+EN 
Sbjct: 537 HTAPYQIAAKSGTSQVFSLKENQTYNAKMIPVRLRDHIFYTLFAPYQHPKVAMALILENG 596

Query: 594 GWGAGAAAPIARRVFDY 610
           G     A P AR + D+
Sbjct: 597 GGDGVVAGPTARAILDH 613