Pairwise Alignments

Query, 319 a.a., ABC transporter, substrate-binding protein (cluster 9, phospholipid) from Variovorax sp. SCN45

Subject, 312 a.a., ABC-type transport system involved in resistance to organic solvents, periplasmic component USSDB6C from Pseudomonas fluorescens FW300-N2E2

 Score = 90.1 bits (222), Expect = 6e-23
 Identities = 74/310 (23%), Positives = 133/310 (42%), Gaps = 17/310 (5%)

Query: 1   MENKAHALAAGAFVLGLIAALIALVIWFTRDNTVRNV--YELSTREAVSGLQPQAMVRYR 58
           ME +AH +  G F + ++A  +   +W  + +       YE+   EAVSGL   + V Y 
Sbjct: 1   METRAHHVLIGLFTVIVVAGALLFGLWLAKSSVDSEFKDYEVVFNEAVSGLSRGSSVEYS 60

Query: 59  GIAVGKVTSIDFDPKVKGNVRVRITVDERVPLTTSSFATLSYQGVTGLAFIALDDKGEST 118
           GI VG V ++  DP     V  R+ +    P+   + A L+  G+TG + I L      +
Sbjct: 61  GIKVGDVVNLRLDPNDPRRVLARVRLSGETPIKQDTQAKLALTGITGTSIIQLSGGTPQS 120

Query: 119 VSLKPDNDDPPRIPLKPSMLAQLQDRGEAIINQVEEVTKRANQLLSDPNQKRAADALENI 178
            +L   + +PP I   PS +A+L +  + ++  +  +   AN++ S  N +     LE++
Sbjct: 121 PALTGHDGEPPVIIAAPSPIARLLNNSDDLMTSINLLLHNANEVFSSDNVQSLGKTLEHL 180

Query: 179 ----AAASASANTLLKTLDNTVKTGLNPALTKLPDTMASVKKAAGDVS----RVANNFNT 230
                  +     + + +      G   + T L  T A ++ A G ++    +   +   
Sbjct: 181 EQTTGVIAEQRGDIRQAMQQLASIGKQASAT-LEQTTALMRNANGLLNDQGKQAFGSAGQ 239

Query: 231 TVVRLNAPDGPVER-LSDGTKALAQAVDSFNAATLPRVNRVADDTSHAIRRLGRAADSIN 289
            +  L      +++ L+D   +L   +   NA  L    R   +T  A+R + R  D+  
Sbjct: 240 AMQSLARSTATLDKLLNDNRDSLNNGMQGLNA--LAPAVRELRETLSALRGISRRLDA-- 295

Query: 290 DNPQSLLFGN 299
            NP   L GN
Sbjct: 296 -NPSGYLLGN 304