Pairwise Alignments

Query, 319 a.a., ABC transporter, substrate-binding protein (cluster 9, phospholipid) from Variovorax sp. SCN45

Subject, 312 a.a., ABC-type transport system involved in resistance to organic solvents, periplasmic component from Pseudomonas stutzeri RCH2

 Score =  101 bits (251), Expect = 3e-26
 Identities = 85/316 (26%), Positives = 134/316 (42%), Gaps = 31/316 (9%)

Query: 1   MENKAHALAAGAFVLGLIAALIALVIWFTRDNTVR--NVYELSTREAVSGLQPQAMVRYR 58
           ME +AH +  G F +  +   +   +W  + +  R  N YE+S   AVSGL   + V Y 
Sbjct: 1   METRAHHVLIGLFTVLAVGGALLFALWLGKSSMDREYNYYEISFNRAVSGLSNGSSVEYS 60

Query: 59  GIAVGKVTSIDFDPKVKGNVRVRITVDERVPLTTSSFATLSYQGVTGLAFIALDDKGEST 118
           GI VG V ++  +P     VR RI V    P+   + A L+   +TG   I L      +
Sbjct: 61  GIKVGDVEALWLEPDDPRKVRARIRVYSGTPIKQDTRARLALANITGSMIIQLHSGTPQS 120

Query: 119 VSLKPDNDDPPRIPLKPSMLAQLQDRGEAIINQVEEVTKRANQLLSDPNQKRAADALENI 178
             L+    +PP I   PS L+ L + GE ++  +  + + AN +LS+ N  R    L N+
Sbjct: 121 PPLEGTRGEPPLIIADPSPLSALLENGEDLMTNINNLLRSANLMLSEDNAGRIGRTLANL 180

Query: 179 AAASASANTLLKTLDNTVKTGLNPALTKLPDTMASVKKAAGDVSRVANNFNTTV------ 232
             A+        ++    +  L+ ALT+L         A  +++R+  N N  +      
Sbjct: 181 EQAT--------SVLAEQRGDLSEALTQLGQLGQQTNTALAEITRLTQNANGLIDDEGRQ 232

Query: 233 --VRLNAPDGPVER--------LSDGTKALAQAVDSFNAATLPRVNRVADDTSHAIRRLG 282
                 A    +ER        LSD   AL   +  F+    P +N +   T  A+RR+ 
Sbjct: 233 LLSNAGASMAALERATSRLDALLSDNQGALNNGLQGFSDLG-PAINELR-GTLGALRRV- 289

Query: 283 RAADSINDNPQSLLFG 298
                + DNP   L G
Sbjct: 290 --TQRLEDNPSGFLLG 303