Pairwise Alignments

Query, 388 a.a., ABC transporter, permease protein (cluster 9, phospholipid) from Variovorax sp. SCN45

Subject, 265 a.a., conserved hypothetical integral membrane protein from Pseudomonas stutzeri RCH2

 Score =  122 bits (307), Expect = 9e-33
 Identities = 80/256 (31%), Positives = 137/256 (53%), Gaps = 14/256 (5%)

Query: 142 DFTGLLGQLAIDLCALV-------------RAPHRGPWRDFSGHLYQFGATALHITALVG 188
           D   LLG+  +D+ A +             R+  R  +      LY  G  +L I  + G
Sbjct: 8   DRVALLGRAGLDVLAALGRSTIFLVHALFGRSGLRNGFSLLVKQLYSVGVLSLAIVVVSG 67

Query: 189 LLIGVVLAYLISQQLRQYGAETFVVNILGLSLIRELGPVLAAVLIAGRSGSAITAQIGVM 248
           + IG+VLA      L  YG+E  V  ++ L+L+RELGPV+ A+L AGR+GSA+ A+IG M
Sbjct: 68  IFIGMVLALQGYNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALAAEIGNM 127

Query: 249 RVTEELDAMRVMGIPHGFRLVMPRVLALAIAMPLISLWTSMAALAGGMLAADAALNISPS 308
           + TE+L ++ ++G+     ++ PR+ A  I++PL++L  ++  + GG + A   L +   
Sbjct: 128 KSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPLLTLIFNVVGIWGGAMVAVDWLGVYEG 187

Query: 309 YFLSALPRAVPI-SNLWLAMAKSAVFGVMIALIGCYFGMKVKPNTESLGRGTTSSVVTSI 367
            F + +  +V   S++   + KS VF +++  I  + G   +P +E + R TT +VV + 
Sbjct: 188 SFWANMQNSVNFHSDVLNGVIKSVVFALVVTWIAVFQGYDCEPTSEGISRATTRTVVYAS 247

Query: 368 TAVILVDALFAVLFKG 383
            AV+ +D +   L  G
Sbjct: 248 LAVLGLDFILTALMFG 263