Pairwise Alignments

Query, 310 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 312 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  147 bits (372), Expect = 2e-40
 Identities = 94/288 (32%), Positives = 138/288 (47%), Gaps = 3/288 (1%)

Query: 18  VLAQQGSFTAAALRLGVSKAAMSQRIAELEHAAGAPLVQRTTRSVRLTEAGQRLVEDMRA 77
           V+  +GSFTAAA +LGV+ +A+S+ I  LE A    L +RTTR + +T+AGQ++ +    
Sbjct: 18  VVVNEGSFTAAASKLGVTPSALSKLITRLEQALSVKLFERTTRKLIITQAGQKVYDQSLL 77

Query: 78  PFEQIAHSFAGVRDLAGVPRGLVRVTAPVAFARQQLVPRLADFLRAQPEVRIELDLSDRL 137
                  +          P G + V AP AF    L P +  FL   P ++++L  +D  
Sbjct: 78  MVNAAQQAIEISSSEHAEPAGALTVAAPEAFLNSVLQPFVVPFLAQYPHIQLKLRAADGD 137

Query: 138 SSLAMEGFDLAIRHTAAPPDTHVAWTLCETRSVLVASRAYLRRRGTPREPQALAGHDCLH 197
             L     D+A R T  P +  V   LC+T  VL AS  YL +RGTP  P  LA HDCL+
Sbjct: 138 IDLFKHNIDVAFRLTDKPDENLVLRELCKTNLVLCASPEYLAQRGTPIHPTDLAEHDCLY 197

Query: 198 YPRAQDTPTWHFEARKASAPRITVPVSGPLVANNSEALRDAALSGLGIALVPDFSAQSAL 257
                    W F   + +    TV VSG    N S+       + LGI +  DF  Q AL
Sbjct: 198 LAETDKDHIWTFAKGRETH---TVAVSGRYAVNQSQLRLTGVKNHLGIGIFHDFVVQDAL 254

Query: 258 QSGKLQQVLPQWRSVGAFGERLYAIRPYATHVPQAVTAFVAWLREALA 305
            +GK+ QVL +W     +   +        ++P  +  F+ ++ E L+
Sbjct: 255 AAGKVVQVLQEWNIKSNYHGAIAMQYAQTKYMPARLRVFIDFVLEHLS 302