Pairwise Alignments

Query, 286 a.a., ABC-type spermidine/putrescine transport system, permease component I from Variovorax sp. SCN45

Subject, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

 Score =  167 bits (424), Expect = 2e-46
 Identities = 89/260 (34%), Positives = 155/260 (59%), Gaps = 7/260 (2%)

Query: 18  LVLFTALLLVPLALTAVLSFNVYDPATGPKSGEFTLAHYALVFSDSYYLGIFWRTFWVSA 77
           LVLF   +L+P  +    SF   D A   K   FT  +Y  +  D  Y  +   +F+++ 
Sbjct: 20  LVLF---VLIPNLMIIGTSFLTRDEANLIKFA-FTFENYTRLL-DPLYGKVMLHSFYMAI 74

Query: 78  LVTLICVLVGAPEAYVLSRMRNPWRSALLLVVLAPLLVSVVVRAFGWSMLLGPEGAVNAL 137
           + TLIC+++G P AY++++M   WR  +L +++ P   + ++R +G  ++LG +G +N  
Sbjct: 75  VATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYGLKIVLGTQGILNQA 134

Query: 138 LRLVGI--GPVKILYTNAAVVIALVHVMLPFMVIPVWTSLQKLDPGVENAALSLNATPFT 195
           L  +G+   P++I++T  AV+I LV+++LPFM++P++++++KLD     AA  L A  F 
Sbjct: 135 LMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLDGTYIEAARDLGANKFQ 194

Query: 196 TLRRIVLPQVMPGILSGSLLVFGLAASSFAIPGLLGGRRLKMVATIVYDEYLSELNWPLG 255
           TL R++LP  MPGI+ G LLV   A   F I  LLGG +  ++  ++  + L+  +WP G
Sbjct: 195 TLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVIKSQVLNARDWPFG 254

Query: 256 AAVALVLLVANLVVMLSYNR 275
           AA ++ L +A  +++ +Y R
Sbjct: 255 AATSIALTLAMAIMLYAYYR 274