Pairwise Alignments

Query, 286 a.a., ABC-type spermidine/putrescine transport system, permease component I from Variovorax sp. SCN45

Subject, 283 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  143 bits (361), Expect = 4e-39
 Identities = 85/272 (31%), Positives = 144/272 (52%), Gaps = 4/272 (1%)

Query: 5   KSKATPWWLSGPALVLFTALLLVPLALTAVLSFNVYDPATGPKSGEFTLAHYALVFSDSY 64
           K + +P  + GP  ++  A++ + L     L + ++   + P  G   L ++  + + S 
Sbjct: 2   KHRTSPVLVEGPMPLMAPAVIFLALFFLVPLGYVIWMSLSQPVIG---LQNFGRLLNSSL 58

Query: 65  YLGIFWRTFWVSALVTLICVLVGAPEAYVLSRMRNPWRSALLLVVLAPLLVSVVVRAFGW 124
           +  + + TF  + LVTL+ +L   P AY  +     + + LL VV      S +VR + W
Sbjct: 59  FASVLYNTFKTALLVTLLSLLFAYPLAYAAANGSKRFATFLLTVVALSFWTSYLVRTYAW 118

Query: 125 SMLLGPEGAVNALLRLVGIGPV-KILYTNAAVVIALVHVMLPFMVIPVWTSLQKLDPGVE 183
            ++LG +G V ALL   G  P  KIL+T  +  +A+ H ++PFM + ++  ++++DP   
Sbjct: 119 MVILGNQGPVTALLSWFGWDPTPKILFTTFSATLAMTHALIPFMTMSLFAVMKRIDPLYV 178

Query: 184 NAALSLNATPFTTLRRIVLPQVMPGILSGSLLVFGLAASSFAIPGLLGGRRLKMVATIVY 243
            AA +L A PF     + LP   PGI++G  LVF      + +P LLG  R +M+A I+ 
Sbjct: 179 RAAENLGAHPFRAFVSVYLPLSAPGIVNGCTLVFITCLGFYVMPVLLGSPRDQMIAGIIG 238

Query: 244 DEYLSELNWPLGAAVALVLLVANLVVMLSYNR 275
           D+    L++ LG+A+++VLL   L V   YNR
Sbjct: 239 DQIEQTLDFGLGSAISIVLLALTLAVYGLYNR 270