Pairwise Alignments

Query, 357 a.a., ABC-type spermidine/putrescine transport systems, ATPase components from Variovorax sp. SCN45

Subject, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  248 bits (633), Expect = 2e-70
 Identities = 134/306 (43%), Positives = 194/306 (63%), Gaps = 5/306 (1%)

Query: 4   LRLTDVTKFYGATRAVSAMNLAVEKGEFVSLLGPSGCGKTTTLQMIAGFEAVSSGRIELA 63
           +RL+ ++K +     +  +NL V  GEF+++LGPSGCGKTT L+MIAGFE    G+I L 
Sbjct: 18  IRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLD 77

Query: 64  GKDITHAKANTRGLGIVFQTYALFPHMTVADNVSFGLEMRKMPKAERTERVKQALALVHL 123
            +D+T   A  R +  VFQ+YALFPHMTV +NV+FGL M+K+P++E   RV +AL +V L
Sbjct: 78  DQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRL 137

Query: 124 EAHAARYPRELSGGQRQRVALARALVIEPPVLLLDEPLSNLDAKLREEMQFELRQIQRKV 183
              A R P +LSGGQ+QR+A+ARA+V +P VLLLDE LS LD KLR++MQ EL+Q+QR++
Sbjct: 138 AEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQRQL 197

Query: 184 GTTTVMVTHDQSEAMSISDRVVVMEGGCATQIDHPQRVYEHPSTRFISTFVGKANLLDC- 242
           G T + VTHDQ EA+S+SDR++VM  G   Q   P+ +YE P   F++ F+G+ N+    
Sbjct: 198 GITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQAT 257

Query: 243 RVSGSGAARTCVEV-GALSLDVDDTGFRVDTAALLSVRPEKLQLVPTGRGR---IDGEVQ 298
            +      R  V++ G  S+   +   +      + +RPE L++          I G V 
Sbjct: 258 TIDRIDEKRIRVDIEGIESIVYYEDEVKAGDKLQVLLRPEDLRIEEIKESEEKGIVGHVT 317

Query: 299 ERFFLG 304
           +R + G
Sbjct: 318 DRTYKG 323