Pairwise Alignments

Query, 245 a.a., Murein hydrolase activator NlpD from Variovorax sp. SCN45

Subject, 372 a.a., lipoprotein NlpD from Klebsiella michiganensis M5al

 Score =  127 bits (319), Expect = 3e-34
 Identities = 89/269 (33%), Positives = 124/269 (46%), Gaps = 50/269 (18%)

Query: 27  KAPVAGPGEYVVQPGDTLYRIASRTGRTPGEIARWSNLQDPDRLEAGQVLRVAPPGG--- 83
           K    G   Y V+ GDTL+ IA  TG    ++A+ +N+  P  L  GQ L+V    G   
Sbjct: 104 KGSYTGGSTYTVKRGDTLFYIAWVTGNDFRDLAQRNNIPAPYGLNVGQTLQVGNASGQPI 163

Query: 84  -ASAPSADAS-------------APPPPPPRADRPRP---------------PPPRPAAR 114
               P A AS             A       A +P                 P  +PA  
Sbjct: 164 TGDNPVAQASVKASNGGMLTANSAQKSTAVVASQPTITYSESSGEQSANKMLPNNKPATT 223

Query: 115 EP-DPVVPPAARR--------------SDWGWPAQGQVVAGFNGSS--NKGIDIGGNTGD 157
               PV  PA                 S W WP  G+V+  F+G+   NKGIDI G+ G 
Sbjct: 224 TAVAPVTAPAVSTTQSTASSTSTSSPISSWRWPTDGKVIENFSGAEGGNKGIDIAGSKGQ 283

Query: 158 PVVSIGNGSVAVT-ETLRGYGSVLMVDHGGSYMSVYTNVRSVLVKQGQRVQRGQKIAEIG 216
            +V+  +G V      LRGYG+++++ H   Y+S Y +  ++LVK+ Q ++ GQKIA +G
Sbjct: 284 AIVATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVKEQQDIKAGQKIATMG 343

Query: 217 GADAGHPKLHFEIRYRGKAVDPRQYLPAR 245
                  +LHFEIRY+GK+V+P QYLP R
Sbjct: 344 STGTSSTRLHFEIRYKGKSVNPLQYLPQR 372