Pairwise Alignments

Query, 300 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 291 a.a., putative high-affinity branched-chain amino acid transport system permease protein LivH from Phaeobacter inhibens DSM 17395

 Score =  165 bits (417), Expect = 1e-45
 Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 8/292 (2%)

Query: 12  QGVLSGIVTGSVYALLAVAIVMVFKTTDVPNFSQGEIFMAGGYAAL--FPLVVWGWPYWG 69
           Q ++SG+  G VY L+A+  V+++K T+  NF+QG+  M G +  L          P+W 
Sbjct: 5   QLLVSGLANGCVYGLIALGFVLIYKATEAVNFAQGDFMMLGAFVTLGLTNAEYLHLPFWL 64

Query: 70  AVLASIAVTALLAALFQRVVMQRVTASRGVGVQLVIATLGFAY-LLKGLVRKTGLGDTPR 128
           A   SIA+ A L  L   V+++ +       V ++   LGF      G +     G  P+
Sbjct: 65  AAPLSIAIMAGLGYLLDLVILRHLFGQNQTAVVILTIALGFVIRFFAGAI----WGHEPQ 120

Query: 129 SLPSLVPQDPIMIGQASLTLLDLAIFGSAVVVMVLLYLMFTRTRTGQAMRAVGMNPRGAQ 188
           +L S +    + +    L L DLAI    V++   LY  F RT+ G AM+A   N   A 
Sbjct: 121 TLESPLALGDVQLAGVVLGLADLAIIIVTVLLTWSLYQFFQRTKLGLAMQAASQNQMAAY 180

Query: 189 IVGVKLGSIRMKIWALTGVISAISALLITPKILITPDIGHIAILAYAAAIVGGFTSLPGA 248
            +G+ +  ++  IW L+G  +A++ +L   K  I P+ G + I A+AAA++GGF SLPGA
Sbjct: 181 FMGIPVKRVQGLIWGLSGATAAVAGILFASKGAIDPNAGLLGIKAFAAAVIGGFGSLPGA 240

Query: 249 VVGGFIIGIVENLVGLFISSNAIVVAPFVAIMVVLLVRPQGLLGGKPQVKKV 300
           + GG I+G++E     ++++    +AP+V ++ VL+ RP GL   + + KKV
Sbjct: 241 LAGGLIVGVIEPFAARYLAAGYSQIAPYVLLLAVLVFRPHGLF-SQVRTKKV 291