Pairwise Alignments

Query, 254 a.a., Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 265 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  188 bits (477), Expect = 1e-52
 Identities = 101/249 (40%), Positives = 155/249 (62%), Gaps = 7/249 (2%)

Query: 7   LDVRDISVVFGGLKAVNGLSFEVEQGRIHALIGPNGAGKSTTFNCISRFYTPSSGSVTFE 66
           L V  IS+ FGG+KA+  +SFEVE+G + ++IGPNGAGK++  N IS  Y P  G++ F+
Sbjct: 6   LTVDQISLAFGGVKALTDVSFEVERGAVFSIIGPNGAGKTSMLNSISGRYRPQKGTIHFD 65

Query: 67  GRELTSVSPHRMASLGIARTFQNLELFAELSVLENVLLGTH--SRGAATLGRLLRRPDRE 124
            +++T + P+  A LGI RTFQNL LF  +SVL+N+++G H   +     G L      +
Sbjct: 66  NQDVTHLRPNARADLGIGRTFQNLALFGHMSVLDNIMVGRHHLMKNNWLTGPLYWASPAQ 125

Query: 125 TEDFA-----MHLLERVGLADERHQPARDLDFGRQKLLELARALAIRPKLLLLDEPAAGL 179
            E+ A       +++ + ++  R   A  L +G +K +ELARA+A+ PKL+LLDEP AG+
Sbjct: 126 KEELAHRRQVEEIIDFLDISHVRKSIAGTLSYGLRKRVELARAMALNPKLILLDEPMAGM 185

Query: 180 RNREIESLDRLLKELVARDGITVLLVEHVMQLVMSISDRITVMAFGEKIAEGTPSEIGSN 239
              E E + R + +L    GITV+++EH M +VM IS  + V+ FG+K+  G P  + ++
Sbjct: 186 NLEEKEDMARYILDLNEEFGITVVMIEHDMGVVMDISHEVMVLDFGKKLISGLPEAVMAD 245

Query: 240 ARVIEAYLG 248
             V +AYLG
Sbjct: 246 EHVRQAYLG 254