Pairwise Alignments

Query, 316 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 328 a.a., AraC family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  103 bits (256), Expect = 7e-27
 Identities = 90/310 (29%), Positives = 135/310 (43%), Gaps = 17/310 (5%)

Query: 2   DPLSDVLSMLTVSSTLSSRFEARGRWAFRY-SQYASHIKLGCVLTGRFQLHV-DGAAVPV 59
           D LS++L  L +      R E    W   + +Q A+     C   G   L V DG  +  
Sbjct: 15  DFLSELLRGLRLDGVDYVRCELTAPWGISFPAQEAARFHFIC---GDCWLRVADGDWIE- 70

Query: 60  VLEAGDFFLLTNGLPFSASSDPP---GPLRDGTQLNRDHRGPDGVLRYDGQGAQDGPLVV 116
            L+ GD  LL  G   + +S P     PL   +     H        YD  G   G   +
Sbjct: 71  -LKRGDAVLLPRGGAHALASAPGEKLSPLEAYSVEEVCH------CVYDVCGGGRGKTTI 123

Query: 117 LASGRFALTGEAGELLLRHLPPLIHLRASDPGATPLRGLLDLLGWETAEPRPGASIAQTH 176
           L  G      +A   LLR +P ++ + A       +  +LD +  E    R G+      
Sbjct: 124 LFCGSLRFNMDAMHPLLRMMPDVMRIDALTASEPAIPHMLDAMAREVGASRVGSGGVLAR 183

Query: 177 LAALVLVQALRVHLANA-PQPEGWLGAMTDARIGEALSRMHGDIAQPWTVERLAQSAGMS 235
           LA ++    +R  + +      GW+ A+    +G  ++ MH D  + WTV+ LA+  G S
Sbjct: 184 LADVLAALIIRSWVEHGCGNTNGWVAAVRHPGLGRVIAAMHLDPEKTWTVDSLAKLMGAS 243

Query: 236 RTAFAVRFKTLTGTTPLDYLGGWRMTVARNALRHSDEAIARIAERIGYQSETAFSAAFRR 295
           R+ FA +F  + G TP  YL   RM  AR  L      I+ +A R+GY SE +FS AF+R
Sbjct: 244 RSGFAQQFAAVVGETPARYLTQVRMHQARQWLTRDRMRISVVARRLGYDSEASFSRAFKR 303

Query: 296 MVGESPGRFR 305
           ++G  P  +R
Sbjct: 304 VIGLPPSHYR 313