Pairwise Alignments

Query, 402 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

Subject, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  218 bits (555), Expect = 2e-61
 Identities = 134/373 (35%), Positives = 203/373 (54%), Gaps = 5/373 (1%)

Query: 13  IVLGLLTTIGPFAIDMYLPALPAIGHALGADPHAMQASLMAFFIAVGAGQLVAGPLSDMF 72
           IVLG L  + P AIDMYLPA+P I    G +  A+Q +L A+      GQL+ GPL+D F
Sbjct: 20  IVLGALGALTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSF 79

Query: 73  GRRRPMVAGLVLFMLASIGCALAPDVGVLIALRFLQGLGACACMVTPRAVVRDLYTGPEA 132
           GRR  M+ G+ LF +A++  A    +  L  +R  QG    A  V  +AVVRD++   + 
Sbjct: 80  GRRPVMLCGIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDF 139

Query: 133 ARMMSLLLMVYSVSPILAPLVGSFVAESVGWRAVFGVVAALGLAGLAMLMAFLPETRPAA 192
           AR MS + +V +++P++AP++G  +A   GWR++F V+A      +AM+M  +PET    
Sbjct: 140 ARAMSFVTLVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPE 199

Query: 193 ARLSSNFRSAMAGYGLLLRDRRFMALAFMASFTVSAFFVYVANSPFVMSAHYGVSPRQYA 252
            R    FRS M  Y  L ++   M L F  +F+ +  F ++    FV    YGVSP  + 
Sbjct: 200 NRQPLRFRSTMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGFG 259

Query: 253 LLFALNAVSLLALSQANGWLVTRFGIRRVLRTAVMVQ-AGSIGLLLVLTLA-GIDRLAVM 310
            LF LN V+++AL+  NG  V + G   +LR A+ +Q    IGL +   L  G+      
Sbjct: 260 YLFGLNIVAMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVSWVLDWGLWGTVPF 319

Query: 311 VVLLMIGYGVNGLIVPATFVLAMEGHASLAGTASALIGTMNFAGGALMVALVAPFANGKP 370
           VVL +   G    I   +  L +  +  +AGTAS+L GT+ F  G+++ A+VA     + 
Sbjct: 320 VVLFV---GTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAALPGTET 376

Query: 371 LPMVAGIAACAAV 383
            PM+  +AAC+ +
Sbjct: 377 WPMIFVMAACSVL 389