Pairwise Alignments

Query, 306 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  139 bits (350), Expect = 1e-37
 Identities = 98/302 (32%), Positives = 152/302 (50%), Gaps = 27/302 (8%)

Query: 13  GLGYGLMLFLLAAGLTLVFGIMDVLNLAHGSLFMAGAYV---------AAEAHTRTGSFA 63
           GL  G +L L A GL + FG+M ++N+AHG + M GAY           +  H    S A
Sbjct: 248 GLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLA 307

Query: 64  AAIVIAVAVTVVVALLLEVLLMRRLYTRDHLAQVLATFGVILVADDIVTMAWGPSPVMAP 123
            A+ +A  VT  V L LE  ++R LY R  L  +LAT+G+ L+    V   +GP+     
Sbjct: 308 IALPLAFLVTGAVGLALERGVIRFLYGRP-LETLLATWGISLILQQTVRTIFGPTNREVG 366

Query: 124 TPAALSGPVQLMDGLPYPAYRLVILAGGLLVALALYLLVNHTRIGMRVRAGASDRPMAEL 183
            P+ +SG  +L  GL     RL I+   L V  AL  L+  T +G+++RA   +R MA  
Sbjct: 367 NPSWMSGAFEL-GGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASS 425

Query: 184 MGVRVGRIFNGVFLLGAALAALAGALMGPIVAVQVGMGEAILIPALVVLVIGGIGSVRGA 243
           MG+R   +    F LG+ +A +AG  +  I  V   +G+  +I + +V+V GG+G++ G 
Sbjct: 426 MGIRTPWVDALTFALGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGT 485

Query: 244 FVAALLVGVVDTVGRAFVPMLLRATLPPATAADLGPLFAEVAMYALMVVVLIFRPSGLFS 303
            V A  +G+            L   L P   A LG    ++ +  L+++ +  RP GLF+
Sbjct: 486 LVGAFSLGI------------LNKFLEPYAGAVLG----KILVLVLIILFIQKRPRGLFA 529

Query: 304 AR 305
            +
Sbjct: 530 LK 531