Pairwise Alignments

Query, 668 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 497 a.a., sensor histidine kinase KdpD from Vibrio cholerae E7946 ATCC 55056

 Score = 95.5 bits (236), Expect = 5e-24
 Identities = 79/277 (28%), Positives = 127/277 (45%), Gaps = 22/277 (7%)

Query: 391 ALEDALRAERQLEDKVHER-TQALGRSNAQLAAEIEGRRLAEASLQRALASEREAMQQQR 449
           A  +ALR E ++   V    T +L R++A        R LA    ++ L S R  +    
Sbjct: 225 ASPEALRRESKIAPWVRSLLTLSLARAHAH-------RTLAHVEAEKQLESTRTTL---- 273

Query: 450 QFVSLVSHEFRTPLAVIDATAQSIALPGVEI-----QPRLAKIRRAVQRLTLLVVNCLAD 504
             ++ VSH+ +TPL  I  +A ++  P + +     Q  L  I    +RL   +   L  
Sbjct: 274 --LASVSHDLKTPLGAIIGSATTLTDPSLHLSTETQQELLTSIAEQGERLNRSLTKLLDI 331

Query: 505 DRFHAEGAALKVERVDLRALVERLVQAFGPTDRARIRFSLPACEAWTDGDAALLEIALHN 564
            R+ A     K++ V+   L+  ++    P      +  + +     + D+ L+E  L N
Sbjct: 332 TRYTASALVPKLDWVEPEELIGTVLSRLAPR-LTHHKVQIESQPMLVELDSLLIEQVLIN 390

Query: 565 LVQNAVHYSPAECDVRVSLALVEGGMARVDVEDFGSGIPPDEQARIFERFFRGTSSRKAS 624
           LV+NA  Y+P   ++ ++ A  E     + V D G+GIP +   RIF+RF+R      A 
Sbjct: 391 LVENAAKYTPRGSEIEIACAYQEQQFT-LAVMDNGAGIPDEALPRIFDRFYR-VEGNHAD 448

Query: 625 GTGLGLFLCSEIARAHGGSAVLLRSGPQGSVFRVEVP 661
           GTGLGL +C  I  AH GS  +      G+ F V +P
Sbjct: 449 GTGLGLAICQVIVAAHQGSIRVHNRESGGACFTVTIP 485