Pairwise Alignments

Query, 668 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 90.1 bits (222), Expect = 5e-22
 Identities = 84/274 (30%), Positives = 121/274 (44%), Gaps = 21/274 (7%)

Query: 390  RALEDALR-AERQLEDKVHERTQALGRSNAQLAAEIEGRRLAEASLQRALASEREAMQQQ 448
            R  E +L+ A   LE++V +RT  L + N QL    +              SERE+  + 
Sbjct: 744  REAEQSLKMANETLEERVLQRTLELEKLNKQLVTATQ-------------RSERESQSKS 790

Query: 449  RQFVSLVSHEFRTPL--AVIDATAQSIALPGVEIQPRLAKIRRAVQRLTLLVVNCLADDR 506
            R F++ VSH+   PL  A + A++ S      E+Q     I  A+     L+ + L   R
Sbjct: 791  R-FLAAVSHDLMQPLNAARLFASSLSEVAKEAEVQKLAHHIESALGAAEDLISDLLDISR 849

Query: 507  FHAEGAALKVERVDLRALVERLVQAFGP-TDRARIRFSLPACEAWTDGDAALLEIALHNL 565
              +    L      +  ++  L   F     +  ++FSL     W   D  LL   + N 
Sbjct: 850  LESGKIDLHPHSFAIMDVLSNLNAEFSALAAKQGVQFSLVPSLLWVHSDPKLLRRVIQNF 909

Query: 566  VQNAVHYSPAECDVRVSLALVEGGMARVDVEDFGSGIPPDEQARIFERFFRGTSSRKASG 625
            + NA  Y+P    V + +  V  G  R+DV D G GI  D+Q  IFE F RG   R   G
Sbjct: 910  LTNAFRYNP-NGKVILGVRRVATGQVRIDVWDNGIGIEQDKQQEIFEEFNRGGQVRSDQG 968

Query: 626  TGLGLFLCSEIARAHGGSAVLLRSGP-QGSVFRV 658
             GLGL +   IA    G  + +RS P QGSVF +
Sbjct: 969  LGLGLAISKGIAHVL-GHHISMRSWPGQGSVFSI 1001