Pairwise Alignments

Query, 342 a.a., ABC transporter, permease protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 320 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  184 bits (468), Expect = 2e-51
 Identities = 102/305 (33%), Positives = 177/305 (58%), Gaps = 4/305 (1%)

Query: 38  GLLLIIAALCVGMSFASPYFLTWDNVRAMLLSFSIEGIVVVGMTILLIVGGIDLSVGSVV 97
           G+ L +  LC+  SF +P F+T  N   +L   ++  I   GMT ++++G IDLSVGS++
Sbjct: 20  GIFLSLVMLCIVFSFFNPRFMTVVNFMNILQQVAVVAIAAFGMTWVILLGEIDLSVGSII 79

Query: 98  CFAMVVTGKLFLMGFDPWTAGLVAIGASALIGAMIGGCVTRIGLNHFIASLAFMVIVRGL 157
             A +V  + F  G     A  + + A AL+G + G    ++ L  FI ++A M I RG+
Sbjct: 80  AVAGMVGAQCFAFGMGFAPAIALTLAAGALMGMLNGVLTAKLLLPSFIVTVATMGIYRGM 139

Query: 158 CLALTQGTPQSLFSLPAEFKFIGQGTLFGIPAVILIFLLIVVVSDFVLRRSTLLRRVFYT 217
               T G P  + +    +  IG  +  G+P +I +  ++ V++  VL +++  RR + T
Sbjct: 140 VSLPTNGAPAMIEN--ETWTAIGTESFLGLPIIIWVVAVLFVINQIVLSKTSFGRRAYLT 197

Query: 218 GSNEKAALYSGIRVGHVKFWVTVLCSASAGLAGVIYTARFGAATPTFGMGMELNVIAAAV 277
           G N +AA+YSGI+V  +K  + ++    A ++GV+ ++R  +A    GM  EL+ IAAAV
Sbjct: 198 GGNREAAVYSGIKVDRLKILIFMISGVMAAISGVLLSSRLFSAQTNAGMSYELDAIAAAV 257

Query: 278 IGGASLKGGSGTVLGAVLGLALLSVVTSSLILLDVSPYWQDVIKGLILLAAVTIDHIMNT 337
           +GG SL GG GT++G ++G  ++ V+ + + +L V  ++Q ++KGL++L AV +D  +  
Sbjct: 258 LGGTSLAGGVGTMVGTLIGALIIGVMNNGMNMLSVPYFYQLIVKGLVILVAVWLD--VRA 315

Query: 338 RKTKR 342
           ++ KR
Sbjct: 316 KQAKR 320