Pairwise Alignments

Query, 507 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 504 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  398 bits (1022), Expect = e-115
 Identities = 211/494 (42%), Positives = 309/494 (62%), Gaps = 5/494 (1%)

Query: 4   VSALLELKGISKRFGASRALTGVDFTLHAGEIHALCGENGAGKSTLMNIIDGIHQPDEGE 63
           V+ L  LK ISK FG   AL  V+F +  GE+HAL GENGAGKSTLM ++ G   P +GE
Sbjct: 2   VTELANLKSISKSFGGIHALRSVNFDVRPGEVHALLGENGAGKSTLMRVLGGEIIPSQGE 61

Query: 64  TSLDGRKVVIDGPAHAMRLGIGLVHQEIALCGDATVAENIFMPEINAGKHAWMNYASLNE 123
             ++G++  +  P  A  LGI ++HQE+AL  D +VAENIF+ E+       ++  SL  
Sbjct: 62  VVINGKRTELRDPRDARALGIVVIHQELALAPDLSVAENIFLGELPT----LISRFSLRR 117

Query: 124 RAARVLQRLGQDVDPAALVKDLSISTQQLIEIAKALTLDCKVLILDEPTAALTDNESAAL 183
           RA +++ RLG D+DP  LV  LS++ QQ++EIAKAL+ D K+++ DEPTA L   ++  L
Sbjct: 118 RAKQLIDRLGFDIDPGRLVGTLSVAHQQVVEIAKALSQDIKIIVFDEPTAVLGAQDAMKL 177

Query: 184 FKVLHDLKAQGIGIIYISHRMAEIFAHCSRVTVLRDGRNVHCGPLAELDADALVRRMVGR 243
            +++  L+ +G+GI+YISHR+ E+F    R+TV++DG  V      ++  D ++R MVGR
Sbjct: 178 HQIIRGLRDRGVGIVYISHRLDEVFDIADRMTVMKDGETVGTVATTDVKIDDIIRMMVGR 237

Query: 244 DLGNYYPPKHGDAAHGEPVLEVSDIADGERVHGVSFTLRRGEILGIAGLMGAGRSELAET 303
            + N +P +      G  +L V  +  G  V  VSF++R GEI+G+ GL+G+GR+E+A  
Sbjct: 238 PIANMFPER-SQRTIGAELLNVKKLNAGRMVRDVSFSVRAGEIVGLGGLIGSGRTEVARA 296

Query: 304 VCGLRTATRGAVRLRGRTLAIRKYSDALREGIAYLSEDRKAAGVYLDLPIAQNIASMALR 363
           + G      G + L+G+ L ++   DA++ GI  + EDRK  GV +D PI  N     + 
Sbjct: 297 IFGADPLDSGTISLKGKALKLKSPRDAVKAGIGLVPEDRKEHGVVIDKPIRVNATMARMS 356

Query: 364 RVSSRFGLLQRAAERKLALDLGGKLKLKSDGVDIDVASLSGGNQQKVAIAKLLATNPSVL 423
            V +  G L+ A ER     LG  L+LK+  +D  V+SLSGGNQQKV +AK       V+
Sbjct: 357 SVVNALGFLKPALERTDVTALGKSLRLKASSIDAPVSSLSGGNQQKVVLAKWFHAGGDVI 416

Query: 424 LMDEPTRGVDVGAKSEIHHILRELASQGVGVVVISSELPEIIGLCDRALVIRDGRLAGEV 483
           ++DEPTRGVDVGAK+EI+ ++ +LA  G  V+VISSE  E+ GLCDR L +  G++ GE+
Sbjct: 417 ILDEPTRGVDVGAKAEIYALINKLAEDGKAVLVISSEHQELFGLCDRVLAMGQGQIRGEL 476

Query: 484 QDNEMTEEALLRLA 497
             +  +EE LL L+
Sbjct: 477 TPSNYSEENLLGLS 490



 Score =  105 bits (262), Expect = 4e-27
 Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 18/230 (7%)

Query: 274 VHGVSFTLRRGEILGIAGLMGAGRSELAETVCGLRTATRGAVRLRGRTLAIRKYSDALRE 333
           +  V+F +R GE+  + G  GAG+S L   + G    ++G V + G+   +R   DA   
Sbjct: 21  LRSVNFDVRPGEVHALLGENGAGKSTLMRVLGGEIIPSQGEVVINGKRTELRDPRDARAL 80

Query: 334 GIAYLSEDRKAAGVYLDLPIAQNIASMALRRVSSRFGLLQRAAERKLALDLGGKLKLKSD 393
           GI  + ++   A    DL +A+NI    L  + SRF L +RA           K  +   
Sbjct: 81  GIVVIHQELALAP---DLSVAENIFLGELPTLISRFSLRRRA-----------KQLIDRL 126

Query: 394 GVDID----VASLSGGNQQKVAIAKLLATNPSVLLMDEPTRGVDVGAKSEIHHILRELAS 449
           G DID    V +LS  +QQ V IAK L+ +  +++ DEPT  +      ++H I+R L  
Sbjct: 127 GFDIDPGRLVGTLSVAHQQVVEIAKALSQDIKIIVFDEPTAVLGAQDAMKLHQIIRGLRD 186

Query: 450 QGVGVVVISSELPEIIGLCDRALVIRDGRLAGEVQDNEMTEEALLRLASG 499
           +GVG+V IS  L E+  + DR  V++DG   G V   ++  + ++R+  G
Sbjct: 187 RGVGIVYISHRLDEVFDIADRMTVMKDGETVGTVATTDVKIDDIIRMMVG 236