Pairwise Alignments

Query, 348 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 316 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 19/260 (7%)

Query: 53  VEYWFPVYEMMKQLGRTLGVK--TRYTGTPEYDVNKQLASFEQELARKPAGILLHPMNPD 110
           V+++ PV +  +      GV    +Y      D  +Q    E   A    GI +   + D
Sbjct: 40  VQFFNPVVKGAQDAAAQFGVDLDVQYANN---DPVRQNDLIESATASGVDGIAVAISSSD 96

Query: 111 PFIEPINRAAAMGIPVVTFAAD----SPNSKRTSFITSDNDREGTQAADAIAASMGGKGE 166
            F E I  A   GI V+ F  D    +  + R +++  D    G +  + +    G K  
Sbjct: 97  AFDESICAAVKAGIIVIGFNNDDLDGAKGNCRQAYVGMDELASGYELGNRMIKEFGLKSG 156

Query: 167 YAVLENPGQDNHDRRIAAF---INRMKTKHPGMKLVGRAASNQDPNKAYQAVLSLAQANP 223
             V  NP +        A    I +  T++ G+K V    +  DP +A   +     ANP
Sbjct: 157 DVVF-NPREIPEASFAVARGGGIEKAMTEN-GIK-VETVRAGLDPAEAQNIIAQFLIANP 213

Query: 224 NLGALFMPEANSALGAAQAKVETKKNIKVMCCDVNAKILDMIKSGDVFGSINPNQGMQGY 283
           N+ ALF   + ++   A A  +   +I     D+  +I++ ++SG ++ +++    +QGY
Sbjct: 214 NVKALFGTGSVTSTVGAGAIKDAGVDIPFGGFDLAVEIVNAVESGAMYATMDQQPYLQGY 273

Query: 284 MGMMMLFLAK----NPTLID 299
             +  + LAK     PT ID
Sbjct: 274 YPIAQIALAKKYGLTPTDID 293