Pairwise Alignments

Query, 348 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 296 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 68.2 bits (165), Expect = 3e-16
 Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 7/215 (3%)

Query: 32  AGAGLRGNASDVYVMNVMVSGVEYWFPVY----EMMKQLGRTLGVKTRYTGTPEYDVNKQ 87
           AG  L   AS  +   +  S +    P Y    E MK   +   V          D+NKQ
Sbjct: 12  AGTALTLLASGAFADGIGASLLTQQHPFYIELAEAMKAEAKEKNVALE-VAIANQDLNKQ 70

Query: 88  LASFEQELARKPAGILLHPMNPDPFIEPINRAAAMGIPVVTFAADSPNSKRTSFITSDND 147
           LA  E  + +    I++ P++       I +A   GI V+T    +  +  TS I +DN 
Sbjct: 71  LADVEDFIVKGVDVIVISPVDSQGVRAAIAKAEKAGIKVITVDVPANGATVTSHIGTDNF 130

Query: 148 REGTQAADAIAASMGGKGEYAVLENPGQDNHDRRIAAFINRMKTKHPGMKLVGRAASNQD 207
             G +A + +A  +G KG+ A+++ P   +   R+  F   +  KHP M++V    +   
Sbjct: 131 TGGVKAGELMAEVLGNKGKVAIIDYPTVQSVVNRVNGFKEAI-AKHPEMEIVA-TQTGIT 188

Query: 208 PNKAYQAVLSLAQANPNLGALFMPEANSALGAAQA 242
             +A  A  ++ QANP++  +F    ++AL AA A
Sbjct: 189 RAEALAAAQNMLQANPDITGIFGFGDDAALAAAVA 223