Pairwise Alignments

Query, 348 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 343 a.a., sugar ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 60/253 (23%), Positives = 107/253 (42%), Gaps = 24/253 (9%)

Query: 1   MRRNFLKSAAAAGIGLAGASAFAQQQQAAPAAGAGLRGNASDVYVMNVMVSGVEYWFPVY 60
           M+ + L +A  AG  LA  +A A+ Q A               ++  ++  GV ++    
Sbjct: 6   MKSSALAAALLAGTVLASGAAHAENQIA---------------FIPKLV--GVGFFTSGG 48

Query: 61  EMMKQLGRTLGVKTRYTGTPEYDVNKQLASFEQELARKPAGILLHPMNPDPFIEPINRAA 120
               + G  +G K  Y G  E  V+ Q+      + +    +++  ++PD     + RA 
Sbjct: 49  AGAVKAGEEVGAKVTYDGPTEPSVSGQVQFINNFVNQGYNALIVSSVSPDGLCPALKRAM 108

Query: 121 AMGIPVVTFAADSPNSKRTSFITSDNDRE-GTQAADAIAASMGGKGEYAVL----ENPGQ 175
             G+ V+T+ +D     R+ +I      + G    D   A+ G K E A +     +P  
Sbjct: 109 ERGVLVMTWDSDVNPDCRSYYINQGTPEQLGGLLVDM--AAEGVKKEKAKVAFFYSSPTV 166

Query: 176 DNHDRRIAAFINRMKTKHPGMKLVGRAASNQDPNKAYQAVLSLAQANPNLGALFMPEANS 235
            + +    A   ++  +HPG ++V       D  K+ Q   S+ Q  P+L A+  P+AN+
Sbjct: 167 TDQNAWAEAAKAKIAKEHPGWEIVTTQYGYNDAQKSLQTAESILQTYPDLDAIIAPDANA 226

Query: 236 ALGAAQAKVETKK 248
              AAQA    K+
Sbjct: 227 LPAAAQAAENLKR 239