Pairwise Alignments

Query, 348 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 322 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 54.3 bits (129), Expect = 4e-12
 Identities = 77/320 (24%), Positives = 131/320 (40%), Gaps = 32/320 (10%)

Query: 29  APAAGAGLRGNASDVYVMNVMVS-GVEYWFPVYEMMKQLGRTLGVKTRYTGTPEYDVNKQ 87
           A  A AG+  NA+D  V   M + G  Y+       +   +  G +   +   + D+ KQ
Sbjct: 14  ASVASAGI-ANAADCKVGIAMYTLGAPYFAAQVAAAEDQAKKAGCEVT-SADGQNDMTKQ 71

Query: 88  LASFEQELARKPAGILLHPMNPDPFIEPINRAAAMGIPVVTFAADSPNSKRTSFIT---S 144
           +A  E  +AR    ++L+P +P+  +   + A A G+ VV    DS  + + + +T   S
Sbjct: 72  IADVEDMVARGVNLLILNPRDPEGLVAAADAATAAGVKVVVM--DSSINTKANVVTQVRS 129

Query: 145 DNDREGTQAADAIAASMGGKGEYAVLENPGQDN---HDRRIAAFINRMKTK-----HPGM 196
            ND+ G      +A +M GK    +L +  + N    DRR+  F   ++ +         
Sbjct: 130 SNDQNGVLVGQWLANAMKGKPMKIILLSGDKGNEVGRDRRLGVFKGLVEGQLVNDGKVSF 189

Query: 197 KLVGRAASNQDPNKAYQAVLSLAQANPNLGALFMPEANSALGAAQAKVETKKN--IKVMC 254
           ++VG+            A+  L  A+P+   +     +  LGA +A     K   + +  
Sbjct: 190 EVVGQGWGGWAHEGGLAAMEDLLTAHPDANVVLGENDSMVLGAMKALEAQGKTDVLALAA 249

Query: 255 CDVNAKILDMIKSGDVFGSINPNQGMQGYMGMMMLFLAKNPTLIDPMNDAKRNGANPMAV 314
            D   + L +IK           +G  G  G+    L    T +D    A  NG  P   
Sbjct: 250 ADGQKEALALIK-----------EGKYGATGLNDPDLVAR-TAVDVGLKAV-NGELPADF 296

Query: 315 PFLD-NGLAVVSKANADDFY 333
           P L+    AV++K N D +Y
Sbjct: 297 PKLNLTTPAVITKENVDKYY 316