Pairwise Alignments

Query, 348 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 333 a.a., sugar ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  481 bits (1239), Expect = e-141
 Identities = 237/321 (73%), Positives = 265/321 (82%)

Query: 28  AAPAAGAGLRGNASDVYVMNVMVSGVEYWFPVYEMMKQLGRTLGVKTRYTGTPEYDVNKQ 87
           AA A     R    + YVMNVMVSGVEYWFPVYEM KQ G+  G +T YTGTPEYDVNKQ
Sbjct: 13  AAAATENPFRCKPGEKYVMNVMVSGVEYWFPVYEMFKQAGQQFGCETEYTGTPEYDVNKQ 72

Query: 88  LASFEQELARKPAGILLHPMNPDPFIEPINRAAAMGIPVVTFAADSPNSKRTSFITSDND 147
           +ASF+Q LA+ PAGIL+HPMN DPFIEPINRA   G  VVTFAADSP SKR S+ITSDN 
Sbjct: 73  IASFDQALAQNPAGILVHPMNSDPFIEPINRATDQGTAVVTFAADSPLSKRVSYITSDNT 132

Query: 148 REGTQAADAIAASMGGKGEYAVLENPGQDNHDRRIAAFINRMKTKHPGMKLVGRAASNQD 207
           REG  AAD IA  +GGKGEYAVLENPGQDNHD+RIAAFI RM+ K P MKLVGRAASNQD
Sbjct: 133 REGIYAADKIAEKLGGKGEYAVLENPGQDNHDKRIAAFIARMEEKWPDMKLVGRAASNQD 192

Query: 208 PNKAYQAVLSLAQANPNLGALFMPEANSALGAAQAKVETKKNIKVMCCDVNAKILDMIKS 267
           PNKAYQ + SL QANPNLGA+FMPEANSA+GAAQA  ET   + VMC DVNA ILDMIK+
Sbjct: 193 PNKAYQGLTSLIQANPNLGAVFMPEANSAIGAAQANKETGGKVLVMCADVNANILDMIKA 252

Query: 268 GDVFGSINPNQGMQGYMGMMMLFLAKNPTLIDPMNDAKRNGANPMAVPFLDNGLAVVSKA 327
           G+VFGSINPNQGMQGYMG ++L+LAK+P LIDPMNDAKR+G NPM++P +DNGL++V+  
Sbjct: 253 GEVFGSINPNQGMQGYMGFLLLWLAKHPELIDPMNDAKRSGFNPMSIPVVDNGLSIVTAD 312

Query: 328 NADDFYWDKYLARRGTKGIGE 348
           NADDFYWDKYL RRGTKGI E
Sbjct: 313 NADDFYWDKYLKRRGTKGIEE 333