Pairwise Alignments

Query, 348 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 330 a.a., sugar ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 72/251 (28%), Positives = 107/251 (42%), Gaps = 18/251 (7%)

Query: 1   MRRNFLKSAAAAGIGLAGASAFAQQQQAAPAAGAGLRGNASDVYVMNVMVSGVEYWFPVY 60
           M +  L +A AA + LAGA   A Q            G    V    V + G+ ++  + 
Sbjct: 1   MIKKILAAALAASLSLAGAYTAAAQDT----------GKVGVV----VKIGGIPWFNAME 46

Query: 61  EMMKQLGRTLGVKTRYTGTPEYDVNKQLASFEQELARKPAGILLHPMNPDPFIEPI-NRA 119
             +K+ G  LGV     G    D   Q+ + E  +A+    I + P N    +EP+  +A
Sbjct: 47  AGIKERGEKLGVDAFMVGPTSADPALQVRAIEDLIAQNVKVIGVVP-NDAKVLEPVLTKA 105

Query: 120 AAMGIPVVTFAADSPNSKRTSFITSDNDREGTQAADAIAASMGGKGEYAV-LENPGQDNH 178
              GI V+T  + S       F  +     G   A  +A  MGGKGEYAV + +     H
Sbjct: 106 REKGIIVITHESPSQKGADWDFELASATGFGEAHAKLLAEKMGGKGEYAVFVGSLTVPLH 165

Query: 179 DRRIAAFINRMKTKHPGMKLVG-RAASNQDPNKAYQAVLSLAQANPNLGALFMPEANSAL 237
           +    A I  +K  HP M LVG R    +D +K+    L L  A+P+L       +   +
Sbjct: 166 NAWADAAIEYIKKNHPEMTLVGDRYGVAEDVDKSRSTALDLISAHPDLKGFLAFGSQGPI 225

Query: 238 GAAQAKVETKK 248
           GA +A  E +K
Sbjct: 226 GAGRAIEERRK 236