Pairwise Alignments

Query, 348 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 313 a.a., sugar ABC transporter from Sinorhizobium meliloti 1021

 Score = 57.0 bits (136), Expect = 6e-13
 Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 6/196 (3%)

Query: 83  DVNKQLASFEQELARKPAGILLHPMNPDPFIEPINRAAAMGIPVVTFAAD---SPNSKRT 139
           D NKQ    +  + R    I+L     +  I  + +A   G+P  +F  D   +      
Sbjct: 68  DANKQSQLIDTAIGRGAKAIILDNAGSEASIAAVQKAKDAGVP--SFLIDREINATGVAV 125

Query: 140 SFITSDNDREGTQAADAIAASMGGKGEYAVLENPGQDNHDRRIAAFINRMKTKHPGMKLV 199
           S I S+N +     A+     MG  G Y  L     D +    +   + +  ++P MK+V
Sbjct: 126 SQIVSNNYQGAQLGAEEFVKLMGESGNYVELLGREADLNAGIRSKGYHDVIDEYPEMKMV 185

Query: 200 GRAASNQDPNKAYQAVLSLAQANPNLGALFMPEANSALGA-AQAKVETKKNIKVMCCDVN 258
            + ++N    + Y  + ++ QANP++  +       A+GA A  +   +K++ V+  D +
Sbjct: 186 AQQSANWSQTEGYSKMETILQANPDIKGVISGNDTMAMGAIAALQAAGRKDVIVVGFDGS 245

Query: 259 AKILDMIKSGDVFGSI 274
             + D IKSG +  ++
Sbjct: 246 NDVRDSIKSGGIKATV 261