Pairwise Alignments

Query, 348 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 333 a.a., sugar ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 54.3 bits (129), Expect = 4e-12
 Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 4/201 (1%)

Query: 48  VMVSGVEYWFPVYEMMKQLGR-TLGVKTRYTGTPEYDVNKQLASFEQELARKPAGILLHP 106
           V V+G  ++  + E +   G+    V T   G  + D  +QL   E  +A+    I + P
Sbjct: 35  VKVTGENWFTRMEEGVVAYGKDNPAVSTSQIGPAKADAAQQLRLIEDLVAKNVNAIAVVP 94

Query: 107 MNPDPFIEPINRAAAMGIPVVTFAADSPNSKRTSFITSDNDREGTQAADAIAASMGGKGE 166
           M+P        RA   GI ++T  ADS  + +      DN   G +  + +A  MG  G+
Sbjct: 95  MDPSALEGVFKRAMNRGIKIITHEADSLKNTQVDIEAFDNKVFGARFNEKLAECMGKSGK 154

Query: 167 Y-AVLENPGQDNHDRRIAAFINRMKTKHPGMKLVG-RAASNQDPNKAYQAVLSLAQANPN 224
           + + + + G   H +         K K+P M+LV  +  S  D NKAY+    + +  P+
Sbjct: 155 WTSFVGSLGSLTHVQWADGGAENAK-KYPEMELVSEKNESFNDANKAYEKAREILRKYPD 213

Query: 225 LGALFMPEANSALGAAQAKVE 245
           +       A   +G  +A  E
Sbjct: 214 IKGFQGGSAIDVIGIGRAVEE 234