Pairwise Alignments

Query, 348 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 340 a.a., sugar ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 54.3 bits (129), Expect = 4e-12
 Identities = 52/244 (21%), Positives = 110/244 (45%), Gaps = 14/244 (5%)

Query: 83  DVNKQLASFEQELARKPAGILLHPMNPDPFIEPINRAAAMGIPVVTFAADSPNSKRTSFI 142
           DV  Q+A     +A     I+++P +P  F     +A   GI V+   A+  +S    ++
Sbjct: 71  DVPGQIAHIRNFIAEGVNAIIVNPNSPTAFDPIFAQAKEAGILVIATDAEV-SSPDAIYV 129

Query: 143 TSDNDREGTQAADAIAASMGGKGEYAVLEN-PGQDNHDRRIAAFINRMKTKHPGMKLVGR 201
             D    G   A  +A ++GGKG+   +    G   ++ R+A + +  K  H  +++V  
Sbjct: 130 GIDQTAWGAAGAKWLAETLGGKGKVVAINGVAGHPANEMRVAGYKSVFK-DHADIQVVNE 188

Query: 202 AASNQDPNKAYQAVLSLAQANPNLGALFMPEANSALGAAQAKVETKKNIKVMCCD----- 256
             +N D  +  QA+ ++    P++  + + +  +A GA ++ ++  K  ++         
Sbjct: 189 VNANWDQAQGQQAMQNILATYPDINGVLVQDGMAA-GAWKSIMDAGKAGQIAATGEIRKD 247

Query: 257 -VNAKILDMIKSGDVFGSINPNQGMQGYMGMMMLFLAKNPTLIDPMNDAKRNGANPMAVP 315
            ++  I + + SG    ++NP   M   + + +L L +   L +P    +   A  + +P
Sbjct: 248 FIDLWIKEKLNSG---ATVNPPGVMASALNVAVLML-QGKELKEPAKAGQYGNALYLPIP 303

Query: 316 FLDN 319
           F+D+
Sbjct: 304 FIDS 307