Pairwise Alignments

Query, 348 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 333 a.a., autoinducer 2 ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score = 58.5 bits (140), Expect = 2e-13
 Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 3/188 (1%)

Query: 64  KQLGRTLGVKTRYTGTPEYDVNKQLASFEQELARKPAGILLHPMNPDPFIEPINRAAAMG 123
           K+ G+ LGV   Y G  E  V+ Q+      + +    I++  ++PD     + RA   G
Sbjct: 43  KEAGKALGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRG 102

Query: 124 IPVVTFAADSPNSKRTSFITSDNDREGTQAADAIAASMGGKGEYAV---LENPGQDNHDR 180
           + V+T+ +D+    R+ +I     ++       +A     K    V     +P   + ++
Sbjct: 103 VKVLTWDSDTKPECRSIYINQGTPQQLGGLLVEMAEKQVTKPTAKVAFFYSSPTVTDQNQ 162

Query: 181 RIAAFINRMKTKHPGMKLVGRAASNQDPNKAYQAVLSLAQANPNLGALFMPEANSALGAA 240
            +     +++ +HP  ++V       D  K+ Q    + +A P+L A+  P+AN+   AA
Sbjct: 163 WVKEAKAKIEKEHPQWEVVTTQFGYNDATKSLQTAEGILKAYPDLDAIIAPDANALPAAA 222

Query: 241 QAKVETKK 248
           QA    K+
Sbjct: 223 QAAENLKR 230