Pairwise Alignments

Query, 459 a.a., Chloride channel protein from Variovorax sp. SCN45

Subject, 431 a.a., voltage-gated ClC-type chloride channel ClcB from Klebsiella michiganensis M5al

 Score =  117 bits (292), Expect = 1e-30
 Identities = 101/301 (33%), Positives = 151/301 (50%), Gaps = 17/301 (5%)

Query: 129 GLSIGREGPSVQVAAGVMQHARRWLSPNTTIDGRALLVAGGAAGIAAAFNAPLAGVVFAI 188
           G +IGREG  + +AA       R  +P    + +  +  G AAG+A+A++APLAG +F  
Sbjct: 127 GSAIGREGAMILLAALAASLFARCFTPKD--EWKLWVACGAAAGMASAYHAPLAGSLFIA 184

Query: 189 EELSGRLEARSSGLIITAIVLAGLVA-VSAFGNTSYFGVIRVPRLGWDALGPGLLVTLLS 247
           E L G L   S G ++ A V+A L+  +   G+   + V     L        L   LL+
Sbjct: 185 EILFGTLMLASLGPVVIAAVVALLLTNLLNGGSAPLYHVELHETLRATHYALMLATALLA 244

Query: 248 GAAGGLFARLLTASLTGAPGRFNRWRARFPVRFAAAGGLAVAVIGLVTGGVTFGAGSEAV 307
           G  G LF  L+  S     G F R R   P + A  GGL V ++ L+   V +G G   V
Sbjct: 245 GLCGPLFIWLMGYS----HGCFVRLRLSPPWQLAL-GGLIVGLLSLIAPAV-WGNGYSVV 298

Query: 308 KQMLQGHDELTPLYTVL--KFVATWLTAWCGVPGGIFAPALSIGAGIGDAVSQLGSSEL- 364
           +  L      + + TV   K +A   ++  G PGG+F P L IG GIG   + L    L 
Sbjct: 299 QSYLLSPPLFSAILTVFVCKLLAVLASSGSGAPGGVFTPTLFIGLGIGMLFASLTGLWLP 358

Query: 365 -GPALIAL----GMAAFLAAVTQAPLTAFIIVMEMVDGHSMVLSLMAAAMLASLVSRMIS 419
            G A+  +    GMAAFLAA T AP+ + +++ EM   + ++  L+ A++LAS++SR + 
Sbjct: 359 DGQAIAIVIGLTGMAAFLAATTHAPIMSTLMICEMTGQYVLLPGLLIASVLASVLSRTLR 418

Query: 420 R 420
           R
Sbjct: 419 R 419



 Score = 30.4 bits (67), Expect = 1e-04
 Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 29/198 (14%)

Query: 25  AIVLGYAIAAGLFVVGFTLASDWVFGQFHRFYRAWPWAVLLTTPLLTAGIVWFTLRFF-P 83
           A++L  A+ AGL    F     +  G F R   + PW + L       G++   L    P
Sbjct: 235 ALMLATALLAGLCGPLFIWLMGYSHGCFVRLRLSPPWQLAL------GGLIVGLLSLIAP 288

Query: 84  GAGGSGIPQIKA-ALHPALPEERRFFFASLRLTVAKIGLGAAGFAAGLSIGREGPSVQVA 142
              G+G   +++  L P L      F A L + V K+    A   +G   G   P++ + 
Sbjct: 289 AVWGNGYSVVQSYLLSPPL------FSAILTVFVCKLLAVLASSGSGAPGGVFTPTLFIG 342

Query: 143 AGV----MQHARRWLSPNTTIDGRALLV----AGGAAGIAAAFNAPLAGVVFAIEELSGR 194
            G+          WL      DG+A+ +     G AA +AA  +AP+   +  I E++G+
Sbjct: 343 LGIGMLFASLTGLWLP-----DGQAIAIVIGLTGMAAFLAATTHAPIMSTLM-ICEMTGQ 396

Query: 195 LEARSSGLIITAIVLAGL 212
                 GL+I +++ + L
Sbjct: 397 Y-VLLPGLLIASVLASVL 413