Pairwise Alignments

Query, 524 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  117 bits (292), Expect = 1e-30
 Identities = 127/505 (25%), Positives = 217/505 (42%), Gaps = 37/505 (7%)

Query: 18  AWAATPKDTLVVVKNIDDIVSLDPAEAFEFSSGEVVTNIYERLVQYDAKDPTL-LKPGLA 76
           A A TP D LVV + I +  SLDP      +   ++ N+Y+ LV++  KD TL ++P LA
Sbjct: 24  AAAQTPPDVLVVGQ-IAEPQSLDPHTVTATNDFRILVNVYDGLVRF--KDGTLEVEPALA 80

Query: 77  SAWKPAADGKSIEFTLRKGAAFESGNPVRPDDVVFSFKRVLKLNKAPAFILSQLGWTADN 136
            +WK + DGK+  FTLR+G  F  G+    + V F+F R+LK +  P +       + + 
Sbjct: 81  ESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRMLKKDH-PFYDTGPFPLSFNF 139

Query: 137 IDQMARKGAAPDTLVLGWSGDFGPAYVLSVLAARPGAIVDEKLVLANEKAGDLGNQWLNR 196
               A       T+    S  F P   LS LA   G IV     +A EK G    +   R
Sbjct: 140 ASVKAVNVLDEHTVEFKLSEAFAP--FLSNLAYPTGLIVSP---VAVEKHG----KEYGR 190

Query: 197 NSAGSGPYKLKLYKPKEVLLLEANKKA-ANPPKTGNVLIKSVAESATQRLLIESGDADIA 255
           + +G+GP+K   +   + +++E N     +  K   V+ + + ++ T+   + +G  D+ 
Sbjct: 191 SPSGTGPFKFVEWLSNQRVVVERNPDYWDSAAKLQAVVFRPITDANTRVAEMMAGGIDVM 250

Query: 256 RDLASDQLDALKTRTDVRIEEFPAAAVHFIALNLKNEKLRNPAIWEAMRYLVDYDGISTQ 315
            ++  D L   +   +  + E     V F  LN K     +  + +A  Y V+   +   
Sbjct: 251 VEVPPDNLATFEQDANFAVAEQAGPHVWFTILNTKQGPFADKRVRQAANYAVNKQTLVDD 310

Query: 316 LLKGQMRTHQAFLPVGFAGA-LTTNPYKADPERAKAILAKAGIKGLEIDMDLINAQRFM- 373
           +L+G        +P  F     +  PY  DPE+AKA+LA+AG++  ++   +      M 
Sbjct: 311 VLRGTATVAAGPIPPAFNWVESSVEPYAHDPEKAKALLAEAGVENPQVTFYVTEGGSGML 370

Query: 374 ---DMAQSMQATMAKAGIKLNLLPGTGAQVLTRY------RARKHEAILLYWGPDFFDPH 424
               M  ++QA +   G K+ +        L R       +A   E   +   PD   P+
Sbjct: 371 DPITMGAAIQADLQAVGFKVKIETYEWNTFLGRVNPGLEGKADMAEMAWMTNDPDTV-PY 429

Query: 425 SNAKSFAY-NVDNSDSAYQSTTTWRNSWLVPELSARTMAALKEVDPVKRAAAYQDLQREV 483
              ++ A  +    +S Y S          P+L      A +  D  +R   Y ++Q  V
Sbjct: 430 LTLRTDAMPDKGGFNSGYYSN---------PQLDELLEKARRSTDQAERGKLYGEVQSIV 480

Query: 484 QARSPFIITFQEQNRVALRSNVKGY 508
              +P++     +      + VKG+
Sbjct: 481 HDDAPWLFVANWKQNAVTTAAVKGF 505