Pairwise Alignments

Query, 282 a.a., Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  201 bits (510), Expect = 2e-56
 Identities = 114/271 (42%), Positives = 163/271 (60%), Gaps = 5/271 (1%)

Query: 1   MAELLIEDLTVTYPTASGPVDVVKSL--SLRMGAERIGIVGESGSGKSMTARAILGLVRS 58
           M+ L ++DL V + T  G V  V  L  SL+ G E +GIVGESGSGKS T  AI+GL+  
Sbjct: 2   MSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQG-ETLGIVGESGSGKSQTVFAIMGLLAK 60

Query: 59  PGRATASRMAYDGADLLRQTPSGWRAIRGRRIGMVLQDPKFSLNPVLRVGRQIAEAGLLH 118
            G+ T S   ++G ++L         +R  +I M+ QDP  SLNP ++V  Q+ E  +LH
Sbjct: 61  NGKITGSAK-FEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLH 119

Query: 119 GVFKPAQARDRVLEMLRTVGVDNPERVHDAYPHQLSGGIGQRVMIAAMMIAEPGLLIADE 178
                A+A +  + ML  V +    +    YPH+ SGG+ QRVMIA  ++  P LLIADE
Sbjct: 120 KGMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADE 179

Query: 179 PTSALDVMVRGQVLEMMDREIRKRGMGLLMISHDLKMVAHFCDRVLVMYRGQVVESCAAK 238
           PT+ALDV V+ Q++E+++   R+    ++MI+HDL +VA  CD+VLVMY G+ +E  +  
Sbjct: 180 PTTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVN 239

Query: 239 DLF-RSQHPYTRGLLNCMPTGQNPGQPLPTI 268
           D+F    HPY  GLL+ +P     G+ LPTI
Sbjct: 240 DIFYNPSHPYAEGLLSAIPRLDTEGEVLPTI 270