Pairwise Alignments

Query, 282 a.a., Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 533 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  206 bits (525), Expect = 7e-58
 Identities = 119/265 (44%), Positives = 164/265 (61%), Gaps = 7/265 (2%)

Query: 4   LLIEDLTVTYPTASGPVDVVKSLSLRM-GAERIGIVGESGSGKSMTARAILGLVRSPGRA 62
           L +  L V + T  G V+ VK + L +   E + +VGESGSGKS T   I+GL+   G  
Sbjct: 9   LAVRGLKVDFYTPDGTVEAVKGIDLDVRSGETLAVVGESGSGKSQTMMGIMGLLAKNGTV 68

Query: 63  TASRMAYDGADLLRQTPSGWRAIRGRRIGMVLQDPKFSLNPVLRVGRQIAEAGLLH--GV 120
           T S   Y G +L+   P     +RG +I M+ Q+P  SL+P+  +GRQIAE  + H  G 
Sbjct: 69  TGSAR-YRGQELVGLAPKALNKVRGSKITMIFQEPMTSLDPLYTIGRQIAEPIVHHRGGS 127

Query: 121 FKPAQARDRVLEMLRTVGVDNPERVHDAYPHQLSGGIGQRVMIAAMMIAEPGLLIADEPT 180
           FK  +AR RVLE+L  VG+  P R  D+YPH+LSGG  QRVMIA  +  EP +LIADEPT
Sbjct: 128 FK--EARRRVLELLELVGIPEPGRRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPT 185

Query: 181 SALDVMVRGQVLEMMDREIRKRGMGLLMISHDLKMVAHFCDRVLVMYRGQVVESCAAKDL 240
           +ALDV ++ Q+L+++    R+ GM +++I+HDL +V +F DRV VM RG+VVE     D+
Sbjct: 186 TALDVTIQAQILDLLKSLQRRFGMAIVLITHDLGIVKYFADRVAVMRRGEVVEQGMTADI 245

Query: 241 F-RSQHPYTRGLLNCMPTGQNPGQP 264
           F R +  YTR LL   P+G+    P
Sbjct: 246 FERPKGDYTRMLLEAEPSGRKASPP 270



 Score =  134 bits (338), Expect = 3e-36
 Identities = 93/230 (40%), Positives = 128/230 (55%), Gaps = 11/230 (4%)

Query: 25  SLSLRMGAERIGIVGESGSGKSMTARAILGLVRSPGRATASRMAYDGADLLRQTPSGWRA 84
           +L LR G + IGIVGESGSGKS   RA+L L+ S G          G D         R 
Sbjct: 307 NLRLRQG-QTIGIVGESGSGKSTLGRALLRLLPSSGYYRFGSTDISGFDR-----GAMRP 360

Query: 85  IRGRRIGMVLQDPKFSLNPVLRVGRQIAEAGLLHGVFKPAQARDR-VLEMLRTVGVDNPE 143
           +R R++ +V QDP  SL+P   VG  I E   +H        RDR  +  L+ VG+D   
Sbjct: 361 LR-RQLQLVFQDPYGSLSPRRTVGEIITEGLHVHEPDLSRADRDRRAIAALKEVGLDPAS 419

Query: 144 RVHDAYPHQLSGGIGQRVMIAAMMIAEPGLLIADEPTSALDVMVRGQVLEMMDREIRKRG 203
           R  + YPH+ SGG  QR+ IA  +I +P ++I DEPTSALD  V+GQV+E++     K G
Sbjct: 420 R--NRYPHEFSGGQRQRIAIARAIILKPKVVILDEPTSALDRSVQGQVIELLRDLQEKHG 477

Query: 204 MGLLMISHDLKMVAHFCDRVLVMYRGQVVESCAAKDLFRS-QHPYTRGLL 252
           +  + ISHDL +V    D V+VM  G++VE      +F + + PYT+ L+
Sbjct: 478 LSYIFISHDLSVVKAMSDYVIVMKNGRIVEEGETDAIFDAPREPYTKTLI 527