Pairwise Alignments

Query, 282 a.a., Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  208 bits (530), Expect = 2e-58
 Identities = 114/266 (42%), Positives = 165/266 (62%), Gaps = 3/266 (1%)

Query: 4   LLIEDLTVTYPTASGPVDVVKSLSLRMGA-ERIGIVGESGSGKSMTARAILGLVRSP-GR 61
           L ++DLTV + +  G       +S  + A E + I+GESGSGKS++A AI+GL+ +P G 
Sbjct: 7   LEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPGD 66

Query: 62  ATASRMAYDGADLLRQTPSGWRAIRGRRIGMVLQDPKFSLNPVLRVGRQIAEAGLLHGVF 121
             A  +AY G DL   +    R + GRRI M+ QDP   LNPV  +G Q+ E   +HGV 
Sbjct: 67  ICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGVA 126

Query: 122 KPAQARDRVLEMLRTVGVDNPERVHDAYPHQLSGGIGQRVMIAAMMIAEPGLLIADEPTS 181
             A+AR R +E+L  VG+  PE+  D YPHQ SGG  QR+MI   +   P +LIADEPT+
Sbjct: 127 SGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPTT 186

Query: 182 ALDVMVRGQVLEMMDREIRKRGMGLLMISHDLKMVAHFCDRVLVMYRGQVVESCAAKDLF 241
           ALDV V+ Q+LE++ +   + G+ ++MI+HDL++ A+  DRV+VM  G++VE   A+ +F
Sbjct: 187 ALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAVF 246

Query: 242 RS-QHPYTRGLLNCMPTGQNPGQPLP 266
            +  H YTR L+N +P   +   P P
Sbjct: 247 ENPAHSYTRTLINALPHADDRAPPRP 272



 Score =  166 bits (420), Expect = 1e-45
 Identities = 103/238 (43%), Positives = 146/238 (61%), Gaps = 12/238 (5%)

Query: 23  VKSLSLRMGA-ERIGIVGESGSGKSMTARAILGLVRSPGRATASRMAYDGADLLRQTPSG 81
           VK+LS  + A E IGIVGESGSGKS  AR +LGL      A+     + G D+L+     
Sbjct: 306 VKNLSFDVAAGETIGIVGESGSGKSTVARVLLGL----NEASGGEALFHGRDVLKMDRKQ 361

Query: 82  WRAIRGRRIGMVLQDPKFSLNPVLRVGRQIAEAGLLH-GVFKPAQARDRVLEMLRTVGVD 140
             A R R++ MV QDP  S+NP + V   ++E   +H  + +  + RDRV E+L  VG+ 
Sbjct: 362 LLAFR-RKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGL- 419

Query: 141 NPERVHDAYPHQLSGGIGQRVMIAAMMIAEPGLLIADEPTSALDVMVRGQVLEMMDREIR 200
           NPE     YPHQ SGG  QR+ IA  +  +P L++ DE  SALDV V+ QV++++  E+R
Sbjct: 420 NPEHAK-RYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLL-AELR 477

Query: 201 KR-GMGLLMISHDLKMVAHFCDRVLVMYRGQVVESCAAKDLFRS-QHPYTRGLLNCMP 256
            R G+  + I+HDL +V HF DR++VM  G++VE    +++FR+ QH YTR L+N  P
Sbjct: 478 DRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINATP 535