Pairwise Alignments

Query, 282 a.a., Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 276 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  239 bits (610), Expect = 5e-68
 Identities = 129/252 (51%), Positives = 167/252 (66%), Gaps = 2/252 (0%)

Query: 6   IEDLTVTYPTASGPVDVVKSLSLRMGAERIGIVGESGSGKSMTARAILGLVRSPGRATAS 65
           +  L+V +PT  G    ++ +S  +G E++GIVGESGSGKS  ARAIL  +    R +  
Sbjct: 10  VRTLSVDFPTRHGLAAALRGVSFSVGREKLGIVGESGSGKSTVARAILDSLPPQARVSVE 69

Query: 66  RMAYDGADLLRQTPSGWRA-IRGRRIGMVLQDPKFSLNPVLRVGRQIAEAGLLHGVFKPA 124
            + ++GADL R  P   RA + GRR+ MV QDP+F LNPV+ VGRQIAE+  L G     
Sbjct: 70  GLTFEGADL-RTMPKARRAGLLGRRLSMVPQDPRFGLNPVISVGRQIAESYRLVGGHGRR 128

Query: 125 QARDRVLEMLRTVGVDNPERVHDAYPHQLSGGIGQRVMIAAMMIAEPGLLIADEPTSALD 184
           +AR   L+ L  V + +P   +D YPHQLSGG+GQRVMIA M+   P LL ADEPTSALD
Sbjct: 129 EARALALDALAMVKIADPRATYDRYPHQLSGGMGQRVMIAMMLAPGPALLFADEPTSALD 188

Query: 185 VMVRGQVLEMMDREIRKRGMGLLMISHDLKMVAHFCDRVLVMYRGQVVESCAAKDLFRSQ 244
               G VLE +   +  RGMGL++ISHDL +VA FCDR+LVM +G++VESC A DL R +
Sbjct: 189 STTTGHVLETLHDLVSARGMGLVLISHDLDLVAAFCDRILVMNQGEIVESCRAGDLSRVR 248

Query: 245 HPYTRGLLNCMP 256
           HPY+R LL  +P
Sbjct: 249 HPYSRRLLAAVP 260