Pairwise Alignments

Query, 269 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  192 bits (489), Expect = 1e-53
 Identities = 115/261 (44%), Positives = 156/261 (59%), Gaps = 20/261 (7%)

Query: 10  AGETVIRCQGLDVFY----GHGAQ--RHHAVKQASFEVLRGESFGIVGGSGSGKSTILRV 63
           AG+ ++  + +D FY    G  A+  R HAVK  SF+V  GE+ GIVG SGSGKST+ RV
Sbjct: 276 AGKPILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARV 335

Query: 64  LAGLDGDWQGDV-----DVLGHRRAAGVAPGRAYRLKVQMIFQDPFGSLHPRHTIDRCLS 118
           L GL+    G+      DVL   R   +A    +R KVQM+FQDP+ S++PR T+   +S
Sbjct: 336 LLGLNEASGGEALFHGRDVLKMDRKQLLA----FRRKVQMVFQDPYSSMNPRMTVFDIVS 391

Query: 119 EAMRFHGF----DRIEQRVVSALDRVGLGKSFRFRFPHQLSGGQRQRVAIARALVLEPEV 174
           E  R H       R   RV   L  VGL      R+PHQ SGGQRQR+AIARAL  +PE+
Sbjct: 392 EPWRIHKDILEKTRWRDRVTELLGLVGLNPEHAKRYPHQFSGGQRQRIAIARALACDPEL 451

Query: 175 LLLDEPTSALDASIQAEVLNLLMEVRRDLGTTFLFVSHDLGVIAHMCDRVAVMRQGVVVE 234
           ++ DE  SALD S+Q +V++LL E+R  LG  ++F++HDL ++ H  DR+ VM+ G +VE
Sbjct: 452 VVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVE 511

Query: 235 TLAAARITAGQVAHPYTRELL 255
                 I      H YTR+L+
Sbjct: 512 HATTEEIFRNP-QHAYTRQLI 531



 Score =  148 bits (373), Expect = 3e-40
 Identities = 93/235 (39%), Positives = 129/235 (54%), Gaps = 13/235 (5%)

Query: 33  AVKQASFEVLRGESFGIVGGSGSGKSTILRVLAGLDGDWQGDVDV----LGHRRAAGVAP 88
           A    SF V  GE+  I+G SGSGKS     + GL     GD+         R  + ++ 
Sbjct: 25  ATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPGDICAGSVAYRGRDLSSLSE 84

Query: 89  GRAYRL---KVQMIFQDPFGSLHPRHTIDRCLSEAMRFHGFD---RIEQRVVSALDRVGL 142
           G    L   ++ MIFQDP   L+P +TI   L E    HG        QR +  L RVG+
Sbjct: 85  GERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGVASGAEARQRAIEILGRVGI 144

Query: 143 GKSFRF--RFPHQLSGGQRQRVAIARALVLEPEVLLLDEPTSALDASIQAEVLNLLMEVR 200
            +  +   ++PHQ SGGQRQR+ I  A+ L PE+L+ DEPT+ALD S+QA++L LL +++
Sbjct: 145 PEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPTTALDVSVQAQILELLKKLQ 204

Query: 201 RDLGTTFLFVSHDLGVIAHMCDRVAVMRQGVVVETLAAARITAGQVAHPYTRELL 255
            + G   + ++HDL V A+M DRV VM+ G +VE    AR      AH YTR L+
Sbjct: 205 AEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEE-GEARAVFENPAHSYTRTLI 258