Pairwise Alignments

Query, 305 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  116 bits (290), Expect = 7e-31
 Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 2/294 (0%)

Query: 7   RLDLLDTFIKIGESGSLSKAARLLGTTQPTVSRRLLELERLLGCKLAIRNTANFSLTDEG 66
           R D L  F ++ E GS SK A   G T   VS+RL  LE  LG +L  R T   +LT+ G
Sbjct: 2   RADDLILFYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAG 61

Query: 67  RSLLAEAHDLTDRWSGLSQRLLGGQSRPEGTLRVIGPSGYGTGFLTDAVTDLRAAHPQLR 126
           ++LL  A ++          ++G      G +++  P+  G   L DAV +    HP L 
Sbjct: 62  KALLHGAKNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLT 121

Query: 127 VELTLTDRVVDLAASGAECWVCVGEVRDPGLVCRPLGRMERVLIATPELLKRTG-PVTLA 185
           V+++L +R VDL   G +  +  G + D  L+ R +   + V+ A+P  + R G P+   
Sbjct: 122 VDMSLDNRFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPE 181

Query: 186 RLPQLPCVGLVPYVTGNVRLIDRGGRSR-IVALDTPIRTDSLLASYRAVLNGAGIGAAAP 244
            L +  C+      TG      +G +   IV +     TD+  A  +A L G GI     
Sbjct: 182 DLARHNCLQYAYQTTGATDWEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVPR 241

Query: 245 WMCHDDMQAGRLKRVLPNWWLEPIGVHVALPPGLYRPARVTAFVEALRARMHAL 298
            + + D + G L  V P    + +G++   P     P +V   +E +RAR  A+
Sbjct: 242 CLVYHDFRNGELVDVFPEQVGKKLGIYAVYPFTRQPPNKVRLLIEHIRARYLAI 295