Pairwise Alignments

Query, 1052 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45

Subject, 1065 a.a., NolG efflux transporter from Sinorhizobium meliloti 1021

 Score =  282 bits (722), Expect = 8e-80
 Identities = 256/1063 (24%), Positives = 488/1063 (45%), Gaps = 74/1063 (6%)

Query: 17   LSKWALDHAPLTRYLMVVLMVLGAFAYFQLGQDEDPPFTFRAMVVKTYWPGATAQQVAEQ 76
            L++ +++H      +MV+++VLG F+Y +LG D  P      +VV T + GA+ + V  +
Sbjct: 3    LTRISINHPVFATMMMVMILVLGLFSYGRLGVDHYPETDLPVVVVATTYTGASPESVESE 62

Query: 77   VTDKLERTLQEAPYADKIRSYSKPGESQIIFNIKDSSKSTEVANVWYTVRKKIGDMRATL 136
            ++  +E  L      D I S S  G S ++   +    S + A     VR ++  +    
Sbjct: 63   ISRPIEAALNTIGGIDTITSESYEGRSIVVVQFEVDVDSQDAAQ---EVRDRVARLETKF 119

Query: 137  PAGVQGPFFNDDFGDVYGVI-YALESEGFSYAELKTLADDV-RQQLLRVKDVAKVDQFGV 194
            P GV  P       +   ++  A+ S   +  E+ TLA  V   +L  +  V +V   G 
Sbjct: 120  PDGVATPQVTRYKPEGQAILSVAVSSTSRTLPEITTLATRVINNRLSVISGVGQVSLIGS 179

Query: 195  QDEKVYIEISQKRLAQLGLDFNAVLQQLGSQNAVESAGSISSPQDVVQVRVAGQFTSVDQ 254
             + +V + +   RL   GL  + V++ +  +N   +AG++ S  +   V V G+  +   
Sbjct: 180  SERQVLVVVDPDRLGAYGLAVSTVIEAIRGENQDRAAGTLISGINQRIVTVEGRIANTSG 239

Query: 255  LRDMPIRGSSGSQIKLGDIADIHRGYVDPPAVKVHHQGKEVIALGVSMAKGGDIIALGKA 314
               + +   +G  + L ++A I     +  ++  ++QG+  + L +   +G + + +  A
Sbjct: 240  FNRIIVAQRNGYPVYLSEVATILDTGAEVTSL-ANYQGQTTLGLHIVKVQGANTVEVASA 298

Query: 315  LKATTATIDKRLPA-GVKLAQVQDQPVSVASSVNEFVGVLIEAVAIVLAVSIISLGLHKG 373
            ++   + ++  L    V+L   +D    +AS V++    L+E    VL+V I+ + L+  
Sbjct: 299  VRREVSALNAELTKDNVQLTITRDNSRPIASQVSQVQRTLVEGG--VLSVLIVFIFLNS- 355

Query: 374  GRFGWYIDMRPGLVVAITIPLVLAVTFLAMNYFGIGLHKISLGSLIIALGLLVDDAIIAV 433
                W    R  ++  +T+P+ +  TF A+   G  L+ ++L +L +++G+L+DDAI+  
Sbjct: 356  ----W----RSTVITGLTLPISVIGTFAAIYALGFTLNIMTLMALSLSIGILIDDAIVVR 407

Query: 434  EMMVRKMEEGYDKARAATYAYDVTAKPMLTGTLITAAGFLPIGLAKSVTGEYTFAIFAVT 493
            E + R ++ G D  RAA    +     +L+ TL   A FLP+     + G + F  F VT
Sbjct: 408  ENITRHLQMGKDPVRAALDGTNEIGLAVLSTTLCIVAVFLPVAFMGGLIGRF-FLQFGVT 466

Query: 494  V-IALVLSWIVSVYFVPYLGTLLLKVKAHDPDAPPH-----EMFDSAFY---NAFRRAVN 544
            V +A+V+S  VS    P L ++    ++             E FD  F    + +R  + 
Sbjct: 467  VAVAVVISLFVSFTLDPMLSSVWCDPQSQKTAKRGFFGQLIERFDQWFEGLASRYRSVIY 526

Query: 545  WCVEHRWATIGATVLIFALGIVGMGKVQQQFFPDSSRPEILVDIWFPEGTSFAANEEVAK 604
            +  ++R  TI   + +F + ++ + ++  +F P   + E+ + +   EG S         
Sbjct: 527  FTFDYRKTTIAIVLGMFVVSLLLVPRIGTEFLPPPDQGEVSISLEANEGASLDYMAAKVG 586

Query: 605  RVEKRFMEEAGVSTVSTWIGSGVPRFYLPLDQVFPQTNVSQLIVLAKDLKVRETL---RL 661
            ++E+   E   VS+  + I SG  R +          + SQ     + LK  ETL   R 
Sbjct: 587  QIERALREFNYVSSTYSTINSGEMRGFNKALVAVQLVHSSQ-----RRLKTAETLGPIRR 641

Query: 662  KLPQLLAQEFP-----EVRGRVKLLPNGPPVAYPVQFRVIGPDPALLRGHADEVKAVLRD 716
            +L ++   E       EV G +K          P+Q  ++G     LR  +D + +VL  
Sbjct: 642  RLSRIAGLEISVGQRSEVVGSIK----------PLQLSILGDGDEELRRISDHITSVLAA 691

Query: 717  NPNMRGVNDNWNESVKVIRLEVDQAKARALGVTSQAIAQASKTMFSGTTVGQYREND-LL 775
             P    +  +  +    + + V +  A  LGV+   I    +++ +G  +  +   D   
Sbjct: 692  IPGATEIESSIEKLRPTLAVRVRREAASDLGVSIATIGDTLRSLVAGDAISVWNSPDGET 751

Query: 776  IDIVLRQAPDERQAISDIGNAYIPTS----SGRSIP--LTQIAKPVFTWEPGVMWRENRD 829
             D+V+R     R+  + + N  I T+    +G+ I   L Q+A  V +  P  + R++  
Sbjct: 752  HDVVVRLPAAGRENAAQLRNLPIATARMDDNGKPIMVLLDQVADVVESTAPAQITRKDLS 811

Query: 830  YAITVQGDVIEGLQGATVTTQLLPKLRELEAGWAAAGQGGYRVEVAGAAEESSKGSASIV 889
              I +  + IEG     V   L   + +++         G+R+   G AE  ++ +A  +
Sbjct: 812  RDIRISSN-IEGRTLGDVVADLKAAMTKMDI------PVGFRISFGGDAENLTESTAYAL 864

Query: 890  AGVPIMLFLVFTLLMLQLHSFSRSLLVFITGPMGIAGVAGALLVLNRPFGFVALLGVIAL 949
              + + +  ++ +L  Q  SF + + + +T P+ + GV   LL         +++G++ L
Sbjct: 865  QSLAMAVIFIYIILASQFGSFIQPIAIIMTMPLSLMGVLLGLLFTGSTLNMFSMIGIMML 924

Query: 950  MGMIQRNAVILIDQIEIDRAAGVPAWDAIVESAVRRLRPIVLTAAAAVLAMIPLSRSVFW 1009
            MG++ +NA++L+D   +    G     ++ ++   RLRPIV+T  A +  M+P +  +  
Sbjct: 925  MGLVTKNAILLVDYSNLGVREGKSLRQSLADAGAVRLRPIVMTTLAMIFGMLPTALGLGE 984

Query: 1010 G-----PMAVAIMGGLIVATVLTLLALPAM--YAAAF--RVKR 1043
            G     PMA AI+GGLI +T+L+L+ +P +  Y  AF  RV+R
Sbjct: 985  GGAQRAPMAHAIIGGLISSTLLSLVFVPVVLTYLDAFAGRVRR 1027