Pairwise Alignments

Query, 575 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  234 bits (596), Expect = 9e-66
 Identities = 162/523 (30%), Positives = 260/523 (49%), Gaps = 35/523 (6%)

Query: 60  TYRQLGAAVERAAKGLQDLGVKPGVHVGLYLPNTPHYPIAFFAVLKAGGTVVNYSPLDAE 119
           TY++     +  AKGL ++G+K G H+G++  N P +    FA  K G  +V  +     
Sbjct: 35  TYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATAKIGVVLVTVNTAYKS 94

Query: 120 RVLAHKIEDSRTDILITLD-------LVNLYPQMARLLDSSR--LRKLVVGSLGDYGAAG 170
             LA+ ++ S    L  +D       L  LY  +  L  S R  L       L +    G
Sbjct: 95  HELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTSQRGKLNSEEFPYLKNVIYVG 154

Query: 171 DKVQAQLQGAGQIAPVPTDDRHLRFTDLLKSEGTHQTHPLGDLTEEIVVLQYTGGTTGLP 230
              Q + +G      +     ++    L++++        G  +++++ +QYT GTTG P
Sbjct: 155 ---QEKHRGMYNTTELMLLGNYVSDEKLIEAKK-------GLDSDDVINMQYTSGTTGFP 204

Query: 231 KGAMLTHANLTSASAQYYESTKGDPPILDEGSERFLVVLPLFHIFALSAAMLLGVRLGAA 290
           KG MLTH N+ +      E  K          ER  + +PLFH F +   +L  +  G  
Sbjct: 205 KGVMLTHKNILNNGYYIGEKQKFTE------EERLCLPVPLFHCFGIVLGVLALLTHGGT 258

Query: 291 LVLHTRFDVDAVMNELAASRISVFPGVPTMYTAILSHPKAKEMDLRSLKFCGSGGAPLPV 350
           LV+   FD   V+  +   + +   GVPTM+ A  SHP  +  DL SL+     G+  P+
Sbjct: 259 LVMLEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEMFDLSSLRTGIMAGSTCPI 318

Query: 351 EVEQRFFALTGCHLNE---GWGMTETSPVGTFTPARGV--RKAGSCGMPLPQVRIKLVSL 405
           E  ++   ++  ++ E    +G+TE SPV T T       ++  S G  +P   +K++  
Sbjct: 319 EAMKK--VMSDMYMREITISYGLTEASPVFTMTSVDDPFEKRVESVGKAMPHCEVKII-- 374

Query: 406 DDPSKDVTAFGEAGELCIKGPNVMKGYWNNPKATAESMTPDGYFRSGDVAKMDADGYFYI 465
           D  + +  A G  GE+C +G NVMKGY+  P+ TAE +  DG+  SGD+A  D DGY+ I
Sbjct: 375 DPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSGDLAVEDEDGYYKI 434

Query: 466 VDRTKDMLLCGGYNVYPRVLEEAVYEHPAVAEVCVIGIPDEYRGQSPKAFVKLKEGAGEL 525
           V R KDM++ GG N+YPR +EE +Y  P + +  V+GIPDE  G+   AFV  KEG  E+
Sbjct: 435 VGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFVIPKEGY-EI 493

Query: 526 TLDALKAFLKDRLGKHEMIGALEIRAELPKTAVGKLSKKDLVD 568
             + ++ F  +++ ++++   + +  E P TA GK+ K  L +
Sbjct: 494 KEEDVRDFALEKIARYKVPKHVFVVEEFPMTASGKIQKFKLTE 536