Pairwise Alignments

Query, 473 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 768 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 84.3 bits (207), Expect = 1e-20
 Identities = 97/406 (23%), Positives = 160/406 (39%), Gaps = 32/406 (7%)

Query: 67  QPRHRPCAYVFIANLPHLAEAYGQDFASSASREIQRRLCANFLRSA---ETDLARLRDDC 123
           Q R     Y+ +  L  L +  G D    A +      CA+ L      +  LAR+  D 
Sbjct: 366 QLRTHAMLYLDLDQLKVLNDTAGHDAGDGAIQ-----FCASMLEDVLPFKATLARMGGDE 420

Query: 124 FLLWANDAFATGTVRAGASVSRELETLLSELGA--EPVRAKGITAMAQLHADWIEVRPPE 181
           F +   D     T R    V++ +   LSE+    E +R     ++     D     P  
Sbjct: 421 FSVLLRDC----TERDAVLVAQSIIHALSEVAFVWEHIRFNLTCSIGIRMIDHTATSP-- 474

Query: 182 QLGAAEIELTLWTAQPFPDSGESRADGWRQ------RYRADMDVAVRVSEAVLAEGLSFG 235
           Q+  A+ +     A+   + G +R + +RQ      R + +M+    V +A+  E +   
Sbjct: 475 QMVHAQADTACHAAK---EEGRNRFNLYRQDDEDLRRRQLEMESVNLVHDALANERIELF 531

Query: 236 WQPVVHAGGIATIFYREGRPRIAPGRGEPASLAPEVFLPCLQRLGLARAFDRLVMRRAME 295
            Q +V       + + E   RI    GE  S  P +F+P  +R  LA   DR ++ +   
Sbjct: 532 AQRIVPLNQPDVLLHFEVLVRIKNAAGEYVS--PGIFVPASERYNLAHRLDRKIVEQTFN 589

Query: 296 ALRLRPSA-----HIGVRISAQSAKLDHWWASLLSALDDEYALASRLVIEIAGSGGLADL 350
            L  RP        + + +S  S     + A LL  L D     S++  EI  +  + +L
Sbjct: 590 WLEARPQVLDKLGRVSINLSGNSIGNPDFVAFLLERLRDSRIPCSKVCFEITETAAMRNL 649

Query: 351 EAARDFCAQLQLRGCRIALRDFGAGGDNLAAVQACRPDIVKLDASFLRRARSGAFGRECL 410
             A    +QL+  GC +AL DFG+G  +   +Q    DIVK+D  F+         R  +
Sbjct: 650 NQAIKVLSQLKSLGCVLALDDFGSGLSSFGYLQKLPVDIVKIDGIFVCDMDKNEMDRLMV 709

Query: 411 QGMVSLCGHFATHVVVDGVEREDDVHIALAAGAQWLQGYSVRGSEP 456
           + +  L        V + VE +  +      G  + QGY     +P
Sbjct: 710 RSIHELTKQMGKSTVAEFVENQQILEALQQIGVDYAQGYLFSRPQP 755